RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 HMGB3O15347 200 aaKnown RBP11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 SLC38A11Q08AI6 406 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 HIST2H3PS2Q5TEC6 136 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 SAXO1Q8IYX7 474 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 FRZBQ92765 325 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 PINX1Q96BK5 328 aaKnown RBP11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 PKIBQ9C010 78 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 ETV2O00321 342 aaPredicted RBP11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR2C1O95371 312 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 PPP1CCP36873 323 aaKnown RBP11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 IGFBP7Q16270 282 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 CXorf66Q5JRM2 361 aaPredicted RBP11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 CLRN3Q8NCR9 226 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR5P3Q8WZ94 311 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 PCNX2A6NKB5 2137 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 IGHV3OR15-7A0A075B7D8 119 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 FGF7P21781 194 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 GFRA1P56159 465 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 ERVS71-1P61550 626 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 WDFY1Q8IWB7 410 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 WDYHV1Q96HA8 205 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 IL36RNQ9UBH0 155 aa11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 ZFHX2Q9C0A1 2572 aaPredicted RBP11.31□□□□□ -0.6
PPP4R3B-206ENST00000616407 MSGN1A6NI15 193 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 ZNF727A8MUV8 499 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 RHBDL1O75783 438 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 COX5AP20674 150 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 B3GALT5-AS1P59052 145 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 IL24Q13007 206 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 RTL8BQ17RB0 113 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 WBP1Q96G27 269 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 MTCH1Q9NZJ7 389 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 TXNL1O43396 289 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 VWA1Q6PCB0 445 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 Q6ZT83 130 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 POC1AQ8NBT0 407 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR52M1Q8NGK5 317 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 RPUSD4Q96CM3 377 aaKnown RBP11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 FAM117AQ9C073 453 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 PCDH15Q96QU1 1955 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 IGKV1D-8A0A087WSZ0 117 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 ABCD4O14678 606 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 SHOXO15266 292 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 HKR1P10072 659 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 GZMHP20718 246 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 MALSU1Q96EH3 234 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 AQP10Q96PS8 301 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 MED9Q9NWA0 146 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 COL10A1Q03692 680 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 TRAT1Q6PIZ9 186 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR8G5Q8NG78 346 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 BCL2L2Q92843 193 aaPredicted RBP11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR6C3Q9NZP0 311 aa11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 RCC2Q9P258 522 aaKnown RBP11.3□□□□□ -0.6
PPP4R3B-206ENST00000616407 PRDX2P32119 198 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR2B8PP59922 312 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 TMEM187Q14656 261 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 HTTP42858 3142 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 BTBD17A6NE02 478 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 RAB4BP61018 213 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR52L2PQ8NGH6 319 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 COMMD5Q9GZQ3 224 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 WSB1Q9Y6I7 421 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 PTPRSQ13332 1948 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 MFSD2BA6NFX1 497 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 PGLYRP1O75594 196 aaPredicted RBP11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 C1QL1O75973 258 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 CELA3BP08861 270 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 IL3RAP26951 378 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 ZNF818PQ6ZRF7 136 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 STPG2Q8N412 459 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 TMEM252Q8N6L7 170 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR4F5Q8NH21 305 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 NANPQ8TBE9 248 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR4F4Q96R69 305 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 PROK2Q9HC23 129 aa11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 SPTAN1Q13813 2472 aaKnown RBP11.29□□□□□ -0.6
PPP4R3B-206ENST00000616407 IGKV1-12A0A0C4DH73 117 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 A0A1B0GU03 582 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 ST8SIA5O15466 376 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 IGKV1D-12P01611 117 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 SEC11BP0C7V7 166 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 HOXB1P14653 301 aaPredicted RBP11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 ATP6V0CP27449 155 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 G6PCP35575 357 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR5D13Q8NGL4 314 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 TP53RKQ96S44 253 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 SLC35B3Q9H1N7 401 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 GP6Q9HCN6 339 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 KCNIP2Q9NS61 270 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 OR1A1Q9P1Q5 309 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 KIAA1549LQ6ZVL6 1849 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 RNF222A6NCQ9 220 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 E9PLN8 166 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 CDX4O14627 284 aaPredicted RBP11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 SERTAD4Q9NUC0 356 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 IGKV3D-15A0A087WSY6 115 aa11.28□□□□□ -0.6
PPP4R3B-206ENST00000616407 hCG_1809904A0A1W2PP81 198 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms