RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 RPS2P15880 293 aaKnown RBP9.46□□□□□ -0.9
SLIRP-212ENST00000613856 RCC1P18754 421 aaPredicted RBP9.46□□□□□ -0.9
SLIRP-212ENST00000613856 GLIPR1P48060 266 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 EDDM3AQ14507 147 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 PLA1AQ53H76 456 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 AVPI1Q5T686 147 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 FAAP20Q6NZ36 180 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 LYPD2Q6UXB3 125 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 NLRC3Q7RTR2 1065 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 OVCH2Q7RTZ1 564 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 NRARPQ7Z6K4 114 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 ZNF525Q8N782 197 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 DUSP18Q8NEJ0 188 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 ENKURQ8TC29 256 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 NEIL1Q96FI4 390 aaPredicted RBP9.46□□□□□ -0.9
SLIRP-212ENST00000613856 PRRT1Q99946 306 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 DPAGT1Q9H3H5 408 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 NECAP2Q9NVZ3 263 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 OR6C3Q9NZP0 311 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 LPAR3Q9UBY5 353 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 MALRD1Q5VYJ5 2156 aa9.46□□□□□ -0.9
SLIRP-212ENST00000613856 TRBV23-1A0A0A0MS06 115 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 FAM240BA0A1B0GVZ2 78 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 NPIPB11E5RHQ5 1161 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 DVL1O14640 695 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 SSX4O60224 188 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 PMP2P02689 132 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 AMY2AP04746 511 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 CTXN2P0C2S0 81 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 GSTT2P0CG29 244 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 OR3A3P47888 321 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 NPY4RP50391 375 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 EDDM3BP56851 147 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 DSCR9P59020 149 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 MEF2CQ06413 473 aaPredicted RBP9.45□□□□□ -0.9
SLIRP-212ENST00000613856 TRIM16LQ309B1 348 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 C11orf91Q3C1V1 193 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 ZNF782Q6ZMW2 699 aaPredicted RBP9.45□□□□□ -0.9
SLIRP-212ENST00000613856 TMEM17Q86X19 198 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 CENPSQ8N2Z9 138 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 OR8B3Q8NGG8 313 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 OR13A1Q8NGR1 328 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 OR56B4Q8NH76 319 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 CCDC107Q8WV48 283 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 CORO2AQ92828 525 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 OR8B2Q96RD0 313 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 SLC6A7Q99884 636 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 OCEL1Q9H607 264 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 PATZ1Q9HBE1 687 aaKnown RBP9.45□□□□□ -0.9
SLIRP-212ENST00000613856 RAB9BQ9NP90 201 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 MCUBQ9NWR8 336 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 EHFQ9NZC4 300 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 KCNIP1Q9NZI2 227 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 SCP2D1Q9UJQ7 156 aa9.45□□□□□ -0.9
SLIRP-212ENST00000613856 A0A096LNT2 108 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 TRGV10A0A0A0MS01 117 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 hADV38S2A0JD32 116 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 A8MV72 311 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-212ENST00000613856 C12orf77C9JDV5 145 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 KCNAB3O43448 404 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 NDUFB6O95139 128 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 IFNA6P05013 189 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 WNT2P09544 360 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 SCTP09683 121 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 FAM157CP0CG43 387 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 OR5H8P0DN80 308 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 CGB3P0DN86 165 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 CGB7P0DN87 165 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 NDUFB7P17568 137 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 GZMHP20718 246 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 GLP1RP43220 463 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 HERPUD1Q15011 391 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 RBMS2Q15434 407 aaKnown RBP9.44□□□□□ -0.9
SLIRP-212ENST00000613856 CARTPTQ16568 116 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 TMEM30BQ3MIR4 351 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 ZNF660Q6AZW8 331 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-212ENST00000613856 CLEC2AQ6UVW9 174 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 ZNF841Q6ZN19 808 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 IL17RELQ6ZVW7 336 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 TCF23Q7RTU1 214 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 LHFPL1Q86WI0 220 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 TPRX1Q8N7U7 411 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 OR51S1Q8NGJ8 323 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 C10orf105Q8TEF2 133 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 PIMREGQ9BSJ6 248 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 LINC00574Q9H8X3 128 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 TAF9BQ9HBM6 251 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 ING3Q9NXR8 418 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 PCDHB10Q9UN67 800 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 UBE2J1Q9Y385 318 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-212ENST00000613856 LINC00312Q9Y6C7 94 aa9.44□□□□□ -0.9
SLIRP-212ENST00000613856 IGHV4-30-2A0A087WSY4 118 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 TRBV6-7A0A0A0MS04 114 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 TRAV39A0A0B4J263 110 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 IGKV1-6A0A0C4DH72 117 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 ZNF729A6NN14 1252 aaPredicted RBP9.43□□□□□ -0.9
SLIRP-212ENST00000613856 VWC2LB2RUY7 222 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 C15orf65H3BRN8 121 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 HBZP02008 142 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 TCRBP04435 133 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms