RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 TNFRSF9Q07011 255 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 PNRC1Q12796 327 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 C3AR1Q16581 482 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 ZNF664Q8N3J9 261 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 CYB561D1Q8N8Q1 229 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 DEFB124Q8NES8 71 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 OR2G3Q8NGZ4 309 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 RBMXL1Q96E39 390 aaKnown RBP10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 NCOR1P1Q9H4R4 102 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 AK3Q9UIJ7 227 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 ASPMQ8IZT6 3477 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 ZNF407Q9C0G0 2248 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 TRBV24-1A0A075B6N3 115 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 ST8SIA3O43173 380 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 XRCC2O43543 280 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 NRASP01111 189 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 SNRPCP09234 159 aaKnown RBP10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 TMEM187Q14656 261 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 SLC10A1Q14973 349 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 CNN3Q15417 329 aaKnown RBP10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 LIME1Q9H400 295 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 SLC7A10Q9NS82 523 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 LIPGQ9Y5X9 500 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 TTC28Q96AY4 2481 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 URB1O60287 2271 aaKnown RBP10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 PCNX2A6NKB5 2137 aa10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 PRRC2CQ9Y520 2896 aaKnown RBP10.84□□□□□ -0.67
PCDHGA4-202ENST00000612927 A0A096LPE4 126 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 hCG_38984A0A1B0GV85 526 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 A0A1W2PPZ6 126 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 MED19A0JLT2 244 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 CLDN34H7C241 214 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 GEMIN2O14893 280 aaKnown RBP10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 MRPL33O75394 65 aaKnown RBP10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 GCGP01275 180 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 FOXG1P55316 489 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 TUSC5Q8IXB3 177 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 CPEB3Q8NE35 698 aaKnown RBP10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 NAA60Q9H7X0 242 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 CALHM2Q9HA72 323 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 DNAJC13O75165 2243 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 LOC400499M0QZD8 3231 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 SPAARA0A1B0GVQ0 90 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 PITX3O75364 302 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 DFFBO76075 338 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 DIRAS3O95661 229 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 MMP7P09237 267 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 OR5AC1P0C628 307 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 CCL2P13500 99 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 CEBPGP53567 150 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 EWSR1Q01844 656 aaKnown RBP eCLIP10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 PLCXD3Q63HM9 321 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 FBXW12Q6X9E4 464 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 PIGCQ92535 297 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 BOD1Q96IK1 185 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 C18orf12Q96KH6 178 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 CDH20Q9HBT6 801 aa10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 KLF13Q9Y2Y9 288 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA4-202ENST00000612927 MARCH11A6NNE9 402 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 HSPA12AO43301 675 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 SYNGR4O95473 234 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 HBE1P02100 147 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 CCNOP22674 350 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 ATP6V0CP27449 155 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 PIGPP57054 158 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 GNMTQ14749 295 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 TMEM42Q69YG0 159 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 C5orf24Q7Z6I8 188 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 FBXL14Q8N1E6 418 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 R3HDM4Q96D70 268 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 SNX22Q96L94 193 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 OPN3Q9H1Y3 402 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 OR14J1Q9UGF5 321 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 CYB5R3P00387 301 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 AMBPP02760 352 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 PGA5P0DJD9 388 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 PCBD1P61457 104 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 ARF1P84077 181 aaKnown RBP10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 SRSF6Q13247 344 aaKnown RBP10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 COA6Q5JTJ3 125 aaKnown RBP10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 DPPA3Q6W0C5 159 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 LHFPL2Q6ZUX7 228 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 ZFP62Q8NB50 900 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 TOMM40LQ969M1 308 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 ANXA10Q9UJ72 324 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 HSF4Q9ULV5 492 aa10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 RCL1Q9Y2P8 373 aaKnown RBP10.82□□□□□ -0.68
PCDHGA4-202ENST00000612927 EREGO14944 169 aa10.81□□□□□ -0.68
PCDHGA4-202ENST00000612927 OPN1MWP04001 364 aa10.81□□□□□ -0.68
PCDHGA4-202ENST00000612927 FTH1P19P0C7X4 201 aa10.81□□□□□ -0.68
PCDHGA4-202ENST00000612927 OPN1MW2P0DN77 364 aa10.81□□□□□ -0.68
PCDHGA4-202ENST00000612927 OPN1MW3P0DN78 364 aa10.81□□□□□ -0.68
PCDHGA4-202ENST00000612927 NOVA1P51513 510 aaKnown RBP10.81□□□□□ -0.68
PCDHGA4-202ENST00000612927 LIAT1Q6ZQX7 453 aa10.81□□□□□ -0.68
PCDHGA4-202ENST00000612927 VASH2Q86V25 355 aa10.81□□□□□ -0.68
PCDHGA4-202ENST00000612927 CALHM1Q8IU99 346 aa10.81□□□□□ -0.68
PCDHGA4-202ENST00000612927 CLDND2Q8NHS1 167 aa10.81□□□□□ -0.68
PCDHGA4-202ENST00000612927 GNPNAT1Q96EK6 184 aaPredicted RBP10.81□□□□□ -0.68
PCDHGA4-202ENST00000612927 LINC00470Q9BZP3 86 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms