RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 RNF166Q96A37 237 aaPredicted RBP13.25□□□□□ -0.29
CSNK1E-215ENST00000612795 ELOVL1Q9BW60 279 aa13.25□□□□□ -0.29
CSNK1E-215ENST00000612795 STUB1Q9UNE7 303 aa13.25□□□□□ -0.29
CSNK1E-215ENST00000612795 PLECQ15149 4684 aaKnown RBP13.25□□□□□ -0.29
CSNK1E-215ENST00000612795 A0A1W2PN81 502 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 C15orf65H3BRN8 121 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 OR7C1O76099 320 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 HLA-DRB1P01911 266 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 CSTBP04080 98 aaKnown RBP13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 BLVRBP30043 206 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 CHRNA7P36544 502 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 ZNF137PP52743 207 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 LSAMPQ13449 338 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 HAGHQ16775 308 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 Q3ZCU0 254 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 SLC25A48Q6ZT89 311 aaKnown RBP13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 NEK7Q8TDX7 302 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 CCDC107Q8WV48 283 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 TNFAIP8L1Q8WVP5 186 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 NSL1Q96IY1 281 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 GNG12Q9UBI6 72 aa13.24□□□□□ -0.29
CSNK1E-215ENST00000612795 IGHV7-81A0A0B4J1V7 117 aa13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 HTR3BO95264 441 aa13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 CCR9P51686 369 aa13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 ACTBP60709 375 aa13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 FDX2Q6P4F2 183 aa13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 SATL1Q86VE3 508 aa13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 SERPINA12Q8IW75 414 aa13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 OR5D14Q8NGL3 314 aa13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 CASTOR1Q8WTX7 329 aa13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 FLYWCH2Q96CP2 140 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 ZNF251Q9BRH9 671 aa13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 ERGIC3Q9Y282 383 aa13.23□□□□□ -0.29
CSNK1E-215ENST00000612795 GABRPO00591 440 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 MAGEB3O15480 346 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 ORC5O43913 435 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 IGLV1-51P01701 117 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 TMED1Q13445 227 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 FLOT2Q14254 428 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 KCTD20Q7Z5Y7 419 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 MINDY2Q8NBR6 621 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 RFKQ969G6 155 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 THTPAQ9BU02 230 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 ANKRD60Q9BZ19 345 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 CST11Q9H112 138 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 TUBA4BQ9H853 241 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 TPSG1Q9NRR2 321 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 ZNF581Q9P0T4 197 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 KIAA1456Q9P272 454 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 ENOPH1Q9UHY7 261 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 FOXA2Q9Y261 457 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 ST3GAL6Q9Y274 331 aa13.22□□□□□ -0.29
CSNK1E-215ENST00000612795 DAPL1A0PJW8 107 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 AIPO00170 330 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 SLC16A6O15403 523 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 NBR2O15453 112 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 IGHV3-11P01762 117 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 HSPB1P04792 205 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 CALB2P22676 271 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 CNTFRP26992 372 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 VHLP40337 213 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 ZNF439Q8NDP4 499 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 OR10V1Q8NGI7 309 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 RAB9BQ9NP90 201 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 A3GALT2U3KPV4 340 aa13.21□□□□□ -0.29
CSNK1E-215ENST00000612795 RBMY1BA6NDE4 496 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 RBMY1EA6NEQ0 496 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 OR4C45A6NMZ5 311 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 SPINT2O43291 252 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 SLC25A17O43808 307 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 LANCL1O43813 399 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 SOX15O60248 233 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 RBMY1DP0C7P1 496 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 ALKBH1Q13686 389 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 C5orf64Q2M2E5 130 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 ATAD3CQ5T2N8 411 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 LIN54Q6MZP7 749 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 GTSCR1Q86UQ5 136 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 PRR18Q8N4B5 295 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 ABHD5Q8WTS1 349 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 TSEN15Q8WW01 171 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 TMED9Q9BVK6 235 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 IFT22Q9H7X7 185 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 RETNQ9HD89 108 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 DHDHQ9UQ10 334 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 FRAS1Q86XX4 4008 aa13.2□□□□□ -0.3
CSNK1E-215ENST00000612795 C12orf77C9JDV5 145 aa13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 J3QLW9 94 aa13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 ARPC1BO15143 372 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 ZNF19P17023 458 aa13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 RAB3AP20336 220 aa13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 ZNF134P52741 427 aa13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 RBM11P57052 281 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 TMEM30BQ3MIR4 351 aa13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 CT45A1Q5HYN5 189 aa13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 STX19Q8N4C7 294 aa13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 PARP16Q8N5Y8 322 aa13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 TCTEX1D1Q8N7M0 179 aa13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 OR8J1Q8NGP2 316 aa13.19□□□□□ -0.3
CSNK1E-215ENST00000612795 CT45A3Q8NHU0 189 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms