RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 A0A1W2PP11 408 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 IRGMA1A4Y4 181 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 AIPO00170 330 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 GPX5O75715 221 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 IGHV3-43DP0DP04 118 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 GPR176Q14439 515 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 FAM53AQ6NSI3 398 aaPredicted RBP13.97□□□□□ -0.17
SSBP1-215ENST00000612337 STX19Q8N4C7 294 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 OR13C5Q8NGS8 318 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 GHSRQ92847 366 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 RAX2Q96IS3 184 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 SPACA1Q9HBV2 294 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.97□□□□□ -0.17
SSBP1-215ENST00000612337 PLSCR3Q9NRY6 295 aa13.97□□□□□ -0.17
SSBP1-215ENST00000612337 RCC2Q9P258 522 aaKnown RBP13.97□□□□□ -0.17
SSBP1-215ENST00000612337 CCL24O00175 119 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 TXNL1O43396 289 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 MOSP00540 346 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 LALBAP00709 142 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 RPLP1P05386 114 aaKnown RBP13.96□□□□□ -0.17
SSBP1-215ENST00000612337 MYL12AP19105 171 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 ZNF137PP52743 207 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 GP2P55259 537 aaKnown RBP13.96□□□□□ -0.17
SSBP1-215ENST00000612337 Q499Y3 187 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 SLC25A48Q6ZT89 311 aaKnown RBP13.96□□□□□ -0.17
SSBP1-215ENST00000612337 RNF152Q8N8N0 203 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 ZNF439Q8NDP4 499 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 OR8H1Q8NGG4 311 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 S1PR3Q99500 378 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 DCLRE1BQ9H816 532 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 RAB9BQ9NP90 201 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 CKLFQ9UBR5 152 aa13.96□□□□□ -0.17
SSBP1-215ENST00000612337 DIMT1Q9UNQ2 313 aaKnown RBP13.96□□□□□ -0.17
SSBP1-215ENST00000612337 EXOSC1Q9Y3B2 195 aaKnown RBP13.96□□□□□ -0.17
SSBP1-215ENST00000612337 MAGEA13PA6NCF6 341 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 C12orf77C9JDV5 145 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 SLC31A2O15432 143 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 RRP9O43818 475 aaKnown RBP13.95□□□□□ -0.18
SSBP1-215ENST00000612337 RPS11P62280 158 aaKnown RBP eCLIP13.95□□□□□ -0.18
SSBP1-215ENST00000612337 DGCR2P98153 550 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 FOXE3Q13461 319 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 GPR50Q13585 617 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 LRRC36Q1X8D7 754 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 TMEM30BQ3MIR4 351 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 YIF1BQ5BJH7 314 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 CXorf66Q5JRM2 361 aaPredicted RBP13.95□□□□□ -0.18
SSBP1-215ENST00000612337 SYT6Q5T7P8 510 aaPredicted RBP13.95□□□□□ -0.18
SSBP1-215ENST00000612337 DMKNQ6E0U4 476 aaPredicted RBP13.95□□□□□ -0.18
SSBP1-215ENST00000612337 MRPS24Q96EL2 167 aaKnown RBP13.95□□□□□ -0.18
SSBP1-215ENST00000612337 DUX3Q96PT4 197 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 RASL11BQ9BPW5 248 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 C8orf4Q9NR00 106 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 CLEC2DQ9UHP7 191 aa13.95□□□□□ -0.18
SSBP1-215ENST00000612337 TRAV8-7A0A075B6U6 113 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 ZNF736B4DX44 427 aaPredicted RBP13.94□□□□□ -0.18
SSBP1-215ENST00000612337 MCRIP1C9JLW8 97 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 SPINT2O43291 252 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 ELANEP08246 267 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 FSTP19883 344 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 ZNF134P52741 427 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 CFHR3Q02985 330 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 KIR2DS1Q14954 304 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 C6orf183Q5T699 404 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 LCE2DQ5TA82 110 aaPredicted RBP13.94□□□□□ -0.18
SSBP1-215ENST00000612337 LCNL1Q6ZST4 164 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 GAPTQ8N292 157 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 FAM71E2Q8N5Q1 922 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 PACRGLQ8N7B6 248 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 OR8U1Q8NH10 309 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 PGLYRP3Q96LB9 341 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 ETAA1Q9NY74 926 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 GNG12Q9UBI6 72 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 TRAPPC2LQ9UL33 140 aa13.94□□□□□ -0.18
SSBP1-215ENST00000612337 HUWE1Q7Z6Z7 4374 aaKnown RBP13.93□□□□□ -0.18
SSBP1-215ENST00000612337 RAMP3O60896 148 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 VHLP40337 213 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 CDX1P47902 265 aaPredicted RBP13.93□□□□□ -0.18
SSBP1-215ENST00000612337 RAB25P57735 213 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 MED21Q13503 144 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 RCN1Q15293 331 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 DEFB136Q30KP8 78 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 CT45A1Q5HYN5 189 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 TTC23Q5W5X9 447 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 RAB12Q6IQ22 244 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 TRAT1Q6PIZ9 186 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 GLIPR1L1Q6UWM5 242 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 JAGN1Q8N5M9 183 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 ZNF485Q8NCK3 441 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 OR4K15Q8NH41 348 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 CT45A3Q8NHU0 189 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 CYGBQ8WWM9 190 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 MUL1Q969V5 352 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 TMEM80Q96HE8 168 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 WWC2-AS2Q96NR7 200 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 CHCHD3Q9NX63 227 aaKnown RBP13.93□□□□□ -0.18
SSBP1-215ENST00000612337 ZNF580Q9UK33 172 aa13.93□□□□□ -0.18
SSBP1-215ENST00000612337 MRPS28Q9Y2Q9 187 aaKnown RBP13.93□□□□□ -0.18
SSBP1-215ENST00000612337 TRBV5-7A0A0A0MS05 114 aa13.92□□□□□ -0.18
SSBP1-215ENST00000612337 FAM90A10PA6NDY2 464 aa13.92□□□□□ -0.18
SSBP1-215ENST00000612337 FAM90A7PA6NKC0 464 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms