RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 CEACAM3P40198 252 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 BSXQ3C1V8 233 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 CDCP2Q5VXM1 449 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 OR10D4PQ8NGN7 298 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 AQP3Q92482 292 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 OTOFQ9HC10 1997 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 TMEM229AB2RXF0 380 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 LTBRP36941 435 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 UCP2P55851 309 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 TMEM65Q6PI78 240 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 FAM181AQ8N9Y4 354 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 SRXN1Q9BYN0 137 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 OR5AC2Q9NZP5 309 aa12.36□□□□□ -0.43
PCDHB16-201ENST00000609684 SEC11BP0C7V7 166 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 ATP6V0CP27449 155 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 UBE2L3P68036 154 aaKnown RBP12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 APCDD1LQ8NCL9 501 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 ZDHHC16Q969W1 377 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 LOXL4Q96JB6 756 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 WDR90Q96KV7 1748 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 ABCA7Q8IZY2 2146 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 PDCD11Q14690 1871 aaKnown RBP12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 TPPP2P59282 170 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 COL10A1Q03692 680 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 NPIPB9F8W1W9 429 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 GYPAP02724 150 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 PMCHP20382 165 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 NHLH2Q02577 135 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 TMEM255AQ5JRV8 349 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 SLC24A4Q8NFF2 622 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 PARP11Q9NR21 331 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 SEC14L6B5MCN3 397 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 K7ESF4 209 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 PAX6P26367 422 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 PNRC1Q12796 327 aaPredicted RBP12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 FAM78BQ5VT40 261 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 FDX2Q6P4F2 183 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 SPNS3Q6ZMD2 512 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 OR1L4Q8NGR5 311 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 ZNRF4Q8WWF5 429 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 NAT8Q9UHE5 227 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 WIPI2Q9Y4P8 454 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 ARL2-SNX15V9GYD0 113 aa12.35□□□□□ -0.43
PCDHB16-201ENST00000609684 A0A1W2PPE3 182 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 DUXBA0A1W2PPF3 345 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 SCTP09683 121 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 PRF1P14222 555 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 RIPPLY2Q5TAB7 128 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 TGIF2LYQ8IUE0 185 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 TGIF2LXQ8IUE1 241 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 OPN3Q9H1Y3 402 aaPredicted RBP12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 MANBALQ9NQG1 85 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 C7orf77A4D0Y5 90 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 C11orf94C9JXX5 98 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 SYNGR1O43759 233 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 PRDX2P32119 198 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 RGP1Q92546 391 aaPredicted RBP12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 RNF24Q9Y225 148 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 IGHMP01871 453 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 LYZP61626 148 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 SUMO1P63165 101 aaKnown RBP12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 MS4A5Q9H3V2 200 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 LRRC3CA6NJW4 275 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 HIST1H3AP68431 136 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 HARBI1Q96MB7 349 aa12.34□□□□□ -0.43
PCDHB16-201ENST00000609684 ERVS71-1P61550 626 aa12.33□□□□□ -0.43
PCDHB16-201ENST00000609684 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.43
PCDHB16-201ENST00000609684 IL17BQ9UHF5 180 aa12.33□□□□□ -0.43
PCDHB16-201ENST00000609684 IGKV3D-11A0A0A0MRZ8 115 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 NMBP08949 121 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 SDHCQ99643 169 aaPredicted RBP12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 TECRQ9NZ01 308 aaKnown RBP12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 THYN1Q9P016 225 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 GREB1Q4ZG55 1949 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 KIAA1324LA8MWY0 1029 aaPredicted RBP12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 FCN1O00602 326 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 P2RY4P51582 365 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 CCL8P80075 99 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 OR4P4Q8NGL7 312 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 ADAMTS17Q8TE56 1095 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 ABHD14AQ9BUJ0 271 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 PIPOXQ9P0Z9 390 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 CLN8Q9UBY8 286 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 PRNDQ9UKY0 176 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 NEUROG3Q9Y4Z2 214 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 ANKRD36A6QL64 1941 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 GATCO43716 136 aaKnown RBP12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 UBE2V2Q15819 145 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 OR8B3Q8NGG8 313 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 OR1B1Q8NGR6 318 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 OR8B2Q96RD0 313 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 RSRP1Q9BUV0 290 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 WDR61Q9GZS3 305 aaKnown RBP12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 TMEM167BQ9NRX6 74 aa12.33□□□□□ -0.44
PCDHB16-201ENST00000609684 NPIPB13A6NJU9 1138 aa12.32□□□□□ -0.44
PCDHB16-201ENST00000609684 NPIPB4C9JG80 1138 aa12.32□□□□□ -0.44
PCDHB16-201ENST00000609684 M0QZ24 198 aa12.32□□□□□ -0.44
PCDHB16-201ENST00000609684 CLDN14O95500 239 aa12.32□□□□□ -0.44
PCDHB16-201ENST00000609684 OR2H2O95918 312 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms