RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 IGHV3-43A0A0B4J1X8 118 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 I3L521 148 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 IGHV3-43DP0DP04 118 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 MYF6P23409 242 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 RAB9AP51151 201 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 TMEM30BQ3MIR4 351 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 SLC25A48Q6ZT89 311 aaKnown RBP12.29□□□□□ -0.44
HDDC2-203ENST00000608284 TMEM104Q8NE00 496 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 OR52N1Q8NH53 320 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 ST6GALNAC6Q969X2 333 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 PELI1Q96FA3 418 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 ZNF251Q9BRH9 671 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 JAM3Q9BX67 310 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 KLK15Q9H2R5 256 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 IFT22Q9H7X7 185 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 PARP11Q9NR21 331 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 MRPS28Q9Y2Q9 187 aaKnown RBP12.29□□□□□ -0.44
HDDC2-203ENST00000608284 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
HDDC2-203ENST00000608284 SORL1Q92673 2214 aa12.29□□□□□ -0.44
HDDC2-203ENST00000608284 TRAV41A0A0B4J266 112 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 ZNF736B4DX44 427 aaPredicted RBP12.28□□□□□ -0.44
HDDC2-203ENST00000608284 LINC01619G3V211 115 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 AIPO00170 330 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 GABRPO00591 440 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 CD2P06729 351 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 OR8U9P0C7N5 309 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 SLC2A2P11168 524 aaPredicted RBP12.28□□□□□ -0.44
HDDC2-203ENST00000608284 POLR2IP36954 125 aaKnown RBP12.28□□□□□ -0.44
HDDC2-203ENST00000608284 GBX2P52951 348 aaPredicted RBP12.28□□□□□ -0.44
HDDC2-203ENST00000608284 GNB1P62873 340 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 C6orf183Q5T699 404 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 ELOVL1Q9BW60 279 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 GABARAPL3Q9BY60 117 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 KIAA1456Q9P272 454 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 TRAPPC2LQ9UL33 140 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 AP4S1Q9Y587 144 aa12.28□□□□□ -0.44
HDDC2-203ENST00000608284 C15orf65H3BRN8 121 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 ZNF780AO75290 641 aaPredicted RBP12.27□□□□□ -0.45
HDDC2-203ENST00000608284 CD40LGP29965 261 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 PPP3R1P63098 170 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 PITPNAQ00169 270 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 SRSF7Q16629 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
HDDC2-203ENST00000608284 MPV17LQ2QL34 196 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 STEAP3Q658P3 488 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 LIN54Q6MZP7 749 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 AMIGO2Q86SJ2 522 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 SGPP2Q8IWX5 399 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 UBALD1Q8TB05 177 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 MYOZ3Q8TDC0 251 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 ALG8Q9BVK2 526 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 CST11Q9H112 138 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 SPACA1Q9HBV2 294 aa12.27□□□□□ -0.45
HDDC2-203ENST00000608284 GAR1Q9NY12 217 aaKnown RBP12.27□□□□□ -0.45
HDDC2-203ENST00000608284 MCRIP1C9JLW8 97 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 G3V318 75 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 J3QRE1 110 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 ARPC1BO15143 372 aaKnown RBP12.26□□□□□ -0.45
HDDC2-203ENST00000608284 CDRT1O95170 752 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 MT-ND4P03905 459 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 IFNA6P05013 189 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 PPIFP30405 207 aaKnown RBP12.26□□□□□ -0.45
HDDC2-203ENST00000608284 RBM11P57052 281 aaKnown RBP12.26□□□□□ -0.45
HDDC2-203ENST00000608284 GPR176Q14439 515 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 NHLRC3Q5JS37 347 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 TRAT1Q6PIZ9 186 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 ASCL4Q6XD76 172 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 LHFPL3Q86UP9 236 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 SYS1Q8N2H4 156 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 PRR18Q8N4B5 295 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 DLX4Q92988 240 aaPredicted RBP12.26□□□□□ -0.45
HDDC2-203ENST00000608284 FLYWCH2Q96CP2 140 aaKnown RBP12.26□□□□□ -0.45
HDDC2-203ENST00000608284 IL36GQ9NZH8 169 aa12.26□□□□□ -0.45
HDDC2-203ENST00000608284 GEMIN2O14893 280 aaKnown RBP12.25□□□□□ -0.45
HDDC2-203ENST00000608284 LANCL1O43813 399 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 JTBO76095 146 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 FADS2O95864 444 aaKnown RBP12.25□□□□□ -0.45
HDDC2-203ENST00000608284 IGLV1-40P01703 118 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 GTF2F2P13984 249 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 SERPINA2P20848 420 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 ZNF93P35789 620 aaPredicted RBP12.25□□□□□ -0.45
HDDC2-203ENST00000608284 ZNF137PP52743 207 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 ACTBP60709 375 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 TMEM267Q0VDI3 215 aaPredicted RBP12.25□□□□□ -0.45
HDDC2-203ENST00000608284 KIAA0141Q14154 515 aaPredicted RBP12.25□□□□□ -0.45
HDDC2-203ENST00000608284 SLC25A30Q5SVS4 291 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 ASPHD1Q5U4P2 390 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 ZNF497Q6ZNH5 498 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 OR10V1Q8NGI7 309 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 PDCD1LG2Q9BQ51 273 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 TM2D3Q9BRN9 247 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 KCNIP1Q9NZI2 227 aa12.25□□□□□ -0.45
HDDC2-203ENST00000608284 EXOGQ9Y2C4 368 aaKnown RBP12.25□□□□□ -0.45
HDDC2-203ENST00000608284 SACSQ9NZJ4 4579 aa12.24□□□□□ -0.45
HDDC2-203ENST00000608284 FAM90A10PA6NDY2 464 aa12.24□□□□□ -0.45
HDDC2-203ENST00000608284 TRIM64CA6NLI5 447 aa12.24□□□□□ -0.45
HDDC2-203ENST00000608284 ATP6V0E1O15342 81 aa12.24□□□□□ -0.45
HDDC2-203ENST00000608284 HLA-DRB1P01911 266 aa12.24□□□□□ -0.45
HDDC2-203ENST00000608284 SOX2P48431 317 aa12.24□□□□□ -0.45
HDDC2-203ENST00000608284 SLURP1P55000 103 aa12.24□□□□□ -0.45
HDDC2-203ENST00000608284 SNRPGP62308 76 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms