RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 SLC35E2BP0CK96 405 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 HADHBP55084 474 aaKnown RBP1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 ZNF322Q6U7Q0 402 aaPredicted RBP1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 LRRC6Q86X45 466 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 ZFAND2AQ8N6M9 145 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 TRIML2Q8N7C3 387 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 MFSD8Q8NHS3 518 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 SPPL2BQ8TCT7 592 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 C19orf60Q96EN9 201 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 MRAP2Q96G30 205 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 TUBA4BQ9H853 241 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 VPREB3Q9UKI3 123 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 CCL26Q9Y258 94 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 SLIT2O94813 1529 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 SLX4Q8IY92 1834 aa1.43□□□□□ -2.18
RNU6-88P-201ENST00000606801 NYNRINQ9P2P1 1898 aaKnown RBP1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 LOC102725191A0A1B0GVB3 256 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 IGSF23A1L1A6 192 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 KLRC4-KLRK1H3BQV0 150 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 GPR171O14626 319 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 TPM1P09493 284 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 UGT2B10P36537 528 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 SKP2Q13309 424 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 RAB31Q13636 194 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 FAM229BQ4G0N7 80 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 SDIM1Q6ZPB5 146 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 VN1R4Q7Z5H5 301 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 YIPF7Q8N8F6 280 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 OR5D18Q8NGL1 313 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 OR11L1Q8NGX0 322 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 IFT81Q8WYA0 676 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 RORBQ92753 470 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 DDIT4LQ96D03 193 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 HBEGFQ99075 208 aa1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 SAMHD1Q9Y3Z3 626 aaKnown RBP1.42□□□□□ -2.18
RNU6-88P-201ENST00000606801 SYNRGQ9UMZ2 1314 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 FN1P02751 2386 aaKnown RBP1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 GOLGA8IPA6NC78 632 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 ODF3BA8MYP8 253 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 J3QKU1 62 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 FADS2O95864 444 aaKnown RBP1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 CRABP1P29762 137 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 DEFA6Q01524 100 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 BSPH1Q075Z2 132 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 TSPAN31Q12999 210 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 FLOT2Q14254 428 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 PDGFRLQ15198 375 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 SPIN4Q56A73 249 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 FBXO48Q5FWF7 155 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 EBLN2Q6P2I7 272 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 C2orf73Q8N5S3 287 aaPredicted RBP1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 ANGPTL6Q8NI99 470 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 C16orf95Q9H693 158 aa1.41□□□□□ -2.18
RNU6-88P-201ENST00000606801 TRGV4A0A0C4DH28 118 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 GOLGA8QA0A0J9YX86 632 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 A8MWP6 167 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 ZNF879B4DU55 563 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 F5H5T6 163 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 LIMS3P0CW19 117 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 LIMS4P0CW20 117 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 P0DMU3 169 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 FAM231AP0DMU4 169 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 FAM231CP0DMU5 169 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 AKR1C4P17516 323 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 GABRA3P34903 492 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 SS18Q15532 418 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 CCDC124Q96CT7 223 aaKnown RBP1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 FAM210AQ96ND0 272 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 UPK3BQ9BT76 320 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 AICDAQ9GZX7 198 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 C11orf49Q9H6J7 331 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 TMEM106BQ9NUM4 274 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 TAS2R9Q9NYW1 312 aa1.4□□□□□ -2.19
RNU6-88P-201ENST00000606801 SDK1Q7Z5N4 2213 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 KIAA2026Q5HYC2 2103 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 EFCAB9A8MZ26 197 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 TP53I11O14683 189 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 OVOL1O14753 267 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 TNFAIP8O95379 198 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 SNAP29O95721 258 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 CRYGDP07320 174 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 CTSEP14091 401 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 BLVRBP30043 206 aaPredicted RBP1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 HES1Q14469 280 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 PAFAH1B3Q15102 231 aaKnown RBP1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 OR4D1Q15615 310 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 DTD1Q8TEA8 209 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 DMAC2Q9NW81 257 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 HEY1Q9Y5J3 304 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 USP42Q9H9J4 1324 aaKnown RBP1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 CR1P17927 2039 aa1.39□□□□□ -2.19
RNU6-88P-201ENST00000606801 SULT1C2O00338 296 aa1.38□□□□□ -2.19
RNU6-88P-201ENST00000606801 DENRO43583 198 aaKnown RBP1.38□□□□□ -2.19
RNU6-88P-201ENST00000606801 CRTAPO75718 401 aaPredicted RBP1.38□□□□□ -2.19
RNU6-88P-201ENST00000606801 CDK14O94921 469 aa1.38□□□□□ -2.19
RNU6-88P-201ENST00000606801 GABRA4P48169 554 aa1.38□□□□□ -2.19
RNU6-88P-201ENST00000606801 HTR4Q13639 388 aa1.38□□□□□ -2.19
RNU6-88P-201ENST00000606801 KRTAP13-4Q3LI77 160 aa1.38□□□□□ -2.19
RNU6-88P-201ENST00000606801 HENMT1Q5T8I9 393 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms