RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 RTP5Q14D33 572 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 GABRG3Q99928 467 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 RAB1BQ9H0U4 201 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 PARP11Q9NR21 331 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 LOC389332A0A1B0GUA5 103 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 ADAD2Q8NCV1 583 aaKnown RBP8.46□□□□□ -1.06
CSMD1-217ENST00000602723 AKIRIN1Q9H9L7 192 aaPredicted RBP8.46□□□□□ -1.06
CSMD1-217ENST00000602723 CA10Q9NS85 328 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 FRRS1LQ9P0K9 344 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 DMKNQ6E0U4 476 aaPredicted RBP8.46□□□□□ -1.06
CSMD1-217ENST00000602723 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.46□□□□□ -1.06
CSMD1-217ENST00000602723 FAM208BQ5VWN6 2430 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 BCL2P10415 239 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 MRPS11P82912 194 aaKnown RBP8.46□□□□□ -1.06
CSMD1-217ENST00000602723 ANKRD37Q7Z713 158 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 TMEM204Q9BSN7 226 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 TRAV38-1A0A0B4J264 116 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 CDX4O14627 284 aaPredicted RBP8.46□□□□□ -1.06
CSMD1-217ENST00000602723 PPYP01298 95 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 ZNF137PP52743 207 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 HMGA2P52926 109 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 TMEM50BP56557 158 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 TMEM108Q6UXF1 575 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 LHFPL5Q8TAF8 219 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 MALRD1Q5VYJ5 2156 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 AHDC1Q5TGY3 1603 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-217ENST00000602723 H7C2G1 150 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 TMUB1Q9BVT8 246 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 ASCL3Q9NQ33 180 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 LINC00862A6NCI5 91 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 ZNF841Q6ZN19 808 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 UBALD2Q8IYN6 164 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 SPEM1Q8N4L4 309 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 J3KRW8 73 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 PPM1DO15297 605 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 DNPH1O43598 174 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 TCTAP57738 103 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 HOXA4Q00056 320 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-217ENST00000602723 SKP2Q13309 424 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 OR4D9Q8NGE8 314 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 BCL7CQ8WUZ0 217 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-217ENST00000602723 WDFY1Q8IWB7 410 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 OR2I1PQ8NGU4 316 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 HOXB3P14651 431 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-217ENST00000602723 MRPL58Q14197 206 aaKnown RBP8.45□□□□□ -1.06
CSMD1-217ENST00000602723 OR4X1Q8NH49 305 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 MIEN1Q9BRT3 115 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 PIPOXQ9P0Z9 390 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 HIST1H1BP16401 226 aaKnown RBP8.45□□□□□ -1.06
CSMD1-217ENST00000602723 TWIST1Q15672 202 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 LINC00596Q86U02 117 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 LY75O60449 1722 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 PAGE4O60829 102 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 SLC25A33Q9BSK2 321 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 MPC1Q9Y5U8 109 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 SLC23A3Q6PIS1 610 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 PRSS41Q7RTY9 318 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 LDLRAD3Q86YD5 345 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 SGMS2Q8NHU3 365 aa8.45□□□□□ -1.06
CSMD1-217ENST00000602723 EML6Q6ZMW3 1958 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 ZNF98A6NK75 572 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 IGFBP6P24592 240 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-217ENST00000602723 PLP1P60201 277 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 SPATA45Q537H7 98 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 ZNF502Q8TBZ5 544 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 RCC2Q9P258 522 aaKnown RBP8.44□□□□□ -1.06
CSMD1-217ENST00000602723 METTL12A8MUP2 240 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 M0R296 226 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 APELAP0DMC3 54 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 METAP1P53582 386 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 MFAP2P55001 183 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 FAM209AQ5JX71 171 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 DTD1Q8TEA8 209 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 TAF1LQ8IZX4 1826 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 CDS2O95674 445 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 RCC1P18754 421 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-217ENST00000602723 KIR2DL1P43626 348 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-217ENST00000602723 KIR2DL2P43627 348 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-217ENST00000602723 FAM219AQ8IW50 185 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 R3HDMLQ9H3Y0 253 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 ZFP64Q9NPA5 681 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 SOCS1O15524 211 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 MUC15Q8N387 334 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 FAM222BQ8WU58 562 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 ABHD3Q8WU67 409 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 ARRDC1-AS1Q9H2J1 176 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 RNF122Q9H9V4 155 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 GALNSP34059 522 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 C12orf54Q6X4T0 127 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 OR2W1Q9Y3N9 320 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 OGG1O15527 345 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 CD82P27701 267 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 LYPD8Q6UX82 237 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 PRNTQ86SH4 94 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 IGHV5-51A0A0C4DH38 117 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 FFAR1O14842 300 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 SMAGPQ0VAQ4 97 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 PIGYQ3MUY2 71 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 FAM209BQ5JX69 171 aa8.44□□□□□ -1.06
CSMD1-217ENST00000602723 TMEM240Q5SV17 173 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms