RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 TEX36Q5VZQ5 186 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 LAMTOR1Q6IAA8 161 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 C11orf87Q6NUJ2 197 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 WDR82Q6UXN9 313 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 HIST2H3AQ71DI3 136 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 CATSPERDQ86XM0 798 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 NDUFA11Q86Y39 141 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 CCDC28AQ8IWP9 274 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 ZDHHC23Q8IYP9 409 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 SLC7A5P1Q8MH63 180 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 ZNF511Q8NB15 262 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 TMEM229BQ8NBD8 167 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 BEND2Q8NDZ0 799 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 DNAAF1Q8NEP3 725 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 CSNK2A3Q8NEV1 391 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 OR11H7Q8NGC8 314 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 OR5H6Q8NGV6 325 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 PPP1R35Q8TAP8 253 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 THEM6Q8WUY1 208 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 CFHR4Q92496 578 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 RGP1Q92546 391 aaPredicted RBP4.23□□□□□ -1.73
VRK3-226ENST00000602029 DMRTB1Q96MA1 342 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 CITED2Q99967 270 aaPredicted RBP4.23□□□□□ -1.73
VRK3-226ENST00000602029 PDCD1LG2Q9BQ51 273 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 UQCC2Q9BRT2 126 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 PRSS22Q9GZN4 317 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 HRASLSQ9HDD0 168 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 SLC2A8Q9NY64 477 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 FRRS1LQ9P0K9 344 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 KAAG1Q9UBP8 84 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 OR14J1Q9UGF5 321 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 UBQLN2Q9UHD9 624 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 IKZF2Q9UKS7 526 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 MGAT4AQ9UM21 535 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 HHLA2Q9UM44 414 aa4.23□□□□□ -1.73
VRK3-226ENST00000602029 AK6Q9Y3D8 172 aaKnown RBP4.23□□□□□ -1.73
VRK3-226ENST00000602029 CSMD3Q7Z407 3707 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 TRAV6A0A075B6T7 132 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 TCRBV4S1A1TA0A5B7 111 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 SMIM30A4D0T7 59 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 METTL21EPA6NDL7 271 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 TMEM210A6NLX4 147 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 NUDT19A8MXV4 375 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 CHST1O43916 411 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 SLC22A5O76082 557 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 BPNT1O95861 308 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 CD3GP09693 182 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 UBBP0CG47 229 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 FAHP16930 419 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 CDK2P24941 298 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 PRSS3P35030 304 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 OR3A3P47888 321 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 RAB13P51153 203 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 EFNB2P52799 333 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 EDDM3BP56851 147 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 ZNF121P58317 390 aaPredicted RBP4.22□□□□□ -1.73
VRK3-226ENST00000602029 ERVFRD-1P60508 538 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 RPL31P62899 125 aaKnown RBP4.22□□□□□ -1.73
VRK3-226ENST00000602029 ZNF345Q14585 488 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 CNN3Q15417 329 aaKnown RBP4.22□□□□□ -1.73
VRK3-226ENST00000602029 FCN2Q15485 313 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 GRK1Q15835 563 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 SSX2Q16385 188 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 RSPO1Q2MKA7 263 aaPredicted RBP4.22□□□□□ -1.73
VRK3-226ENST00000602029 SMIM21Q3B7S5 101 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 ACTBL2Q562R1 376 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 DMRTC1Q5HYR2 192 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 C1orf100Q5SVJ3 147 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 PLCXD3Q63HM9 321 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 STUMQ69YW2 141 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 LIAT1Q6ZQX7 453 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 OR2W3Q7Z3T1 314 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 CENPVQ7Z7K6 275 aaPredicted RBP4.22□□□□□ -1.73
VRK3-226ENST00000602029 TRAPPC6BQ86SZ2 158 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 WDR86Q86TI4 376 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 MKXQ8IYA7 352 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 BATF2Q8N1L9 274 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 Q8N7P7 452 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 ZNRF1Q8ND25 227 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 ZNF680Q8NEM1 530 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 OR52H1Q8NGJ2 320 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 OR52I2Q8NH67 350 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 C8orf46Q8TAG6 207 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 GPX8Q8TED1 209 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 TSEN15Q8WW01 171 aaKnown RBP4.22□□□□□ -1.73
VRK3-226ENST00000602029 SNAPC3Q92966 411 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 C10orf35Q96D05 121 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 GAFA1Q96PS6 74 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 GFI1Q99684 422 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 PRRT1Q99946 306 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 PNRC2Q9NPJ4 139 aaKnown RBP4.22□□□□□ -1.73
VRK3-226ENST00000602029 MRPL22Q9NWU5 206 aaKnown RBP4.22□□□□□ -1.73
VRK3-226ENST00000602029 GHRLQ9UBU3 117 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 ZNF222Q9UK12 451 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 PITPNC1Q9UKF7 332 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 DHDHQ9UQ10 334 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 SESN1Q9Y6P5 492 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 R4GMQ9 66 aa4.22□□□□□ -1.73
VRK3-226ENST00000602029 TET2Q6N021 2002 aaPredicted RBP4.21□□□□□ -1.74
VRK3-226ENST00000602029 hCG_38984A0A1B0GV85 526 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms