RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 RAB22AQ9UL26 194 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 TCF19Q9Y242 345 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 RNF114Q9Y508 228 aa15.65■□□□□ 0.1
UPF1-212ENST00000601689 IFITM5A6NNB3 132 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 CHATP28329 748 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 GDNFP39905 211 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 GNG10P50151 68 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 UNC119Q13432 240 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 Q3ZCU0 254 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 C11orf88Q6PI97 169 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 TSPAN14Q8NG11 270 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 TOMM40LQ969M1 308 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 KCTD7Q96MP8 289 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 RANBP3Q9H6Z4 567 aaPredicted RBP15.64■□□□□ 0.09
UPF1-212ENST00000601689 TXNL4BQ9NX01 149 aaKnown RBP15.64■□□□□ 0.09
UPF1-212ENST00000601689 ABRACLQ9P1F3 81 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 FBLN5Q9UBX5 448 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 MGAT4AQ9UM21 535 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 PSG11Q9UQ72 335 aa15.64■□□□□ 0.09
UPF1-212ENST00000601689 METTL21EPA6NDL7 271 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 TSPAN9O75954 239 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 GADD45AP24522 165 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 PAX6P26367 422 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 RAB7AP51149 207 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 CLDN12P56749 244 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 QRFPP83859 136 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 ARSJQ5FYB0 599 aaPredicted RBP15.63■□□□□ 0.09
UPF1-212ENST00000601689 TPTE2P1Q5T6R2 138 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 SIGIRRQ6IA17 410 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 BAIAP2L2Q6UXY1 529 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 Q6ZTK2 550 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 C16orf82Q7Z2V1 217 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 C6orf201Q7Z4U5 140 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 GAPTQ8N292 157 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 OR2T6Q8NHC8 308 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 FAAP24Q9BTP7 215 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 GFOD1Q9NXC2 390 aa15.63■□□□□ 0.09
UPF1-212ENST00000601689 C15orf65H3BRN8 121 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 RGS11O94810 467 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 FAM106CPP0CH98 169 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 CD36P16671 472 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 VEGFCP49767 419 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 RAB13P51153 203 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 MOB1BQ7L9L4 216 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 DYNAPQ8N1N2 210 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 SGMS2Q8NHU3 365 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 SETD6Q8TBK2 473 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 GALMQ96C23 342 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 GFI1Q99684 422 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 NICN1Q9BSH3 213 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 LPAR5Q9H1C0 372 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 C16orf95Q9H693 158 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 TAF9BQ9HBM6 251 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 HSF4Q9ULV5 492 aa15.62■□□□□ 0.09
UPF1-212ENST00000601689 DNHD1Q96M86 4753 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 STAB1Q9NY15 2570 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 NOTOA8MTQ0 251 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 C12orf77C9JDV5 145 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 PEX14O75381 377 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 IGHV3-7P01780 117 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 HBZP02008 142 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 RELBQ01201 579 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 Q6ZSV7 163 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 FAM89BQ8N5H3 189 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 C8orf31Q8N9H6 132 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 LINC01006Q8NI28 216 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 LEAP2Q969E1 77 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 SULT4A1Q9BR01 284 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 CHCHD6Q9BRQ6 235 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 KCNK15Q9H427 330 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 LIN7BQ9HAP6 207 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 OR2S2Q9NQN1 319 aa15.61■□□□□ 0.09
UPF1-212ENST00000601689 MBNL3Q9NUK0 354 aaKnown RBP15.61■□□□□ 0.09
UPF1-212ENST00000601689 LOC100506127A0A0U1RQW1 187 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 GAPDHP04406 335 aaKnown RBP15.6■□□□□ 0.09
UPF1-212ENST00000601689 RCC1P18754 421 aaPredicted RBP15.6■□□□□ 0.09
UPF1-212ENST00000601689 RAB6AP20340 208 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 KIR2DS4P43632 304 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 OR10A3P58181 314 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 ARL6IP1Q15041 203 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 LDLRAD2Q5SZI1 272 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 OR8H3Q8N146 312 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 LINC00311Q8N616 119 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 MRPL30Q8TCC3 161 aaKnown RBP15.6■□□□□ 0.09
UPF1-212ENST00000601689 PIFOQ8TCI5 191 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 OCSTAMPQ9BR26 566 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 PRSS22Q9GZN4 317 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 JPT1Q9UK76 154 aa15.6■□□□□ 0.09
UPF1-212ENST00000601689 IGHV3-43A0A0B4J1X8 118 aa15.59■□□□□ 0.09
UPF1-212ENST00000601689 TMEM272A0A1B0GTI8 110 aa15.59■□□□□ 0.09
UPF1-212ENST00000601689 A6NDX4 124 aa15.59■□□□□ 0.09
UPF1-212ENST00000601689 SOCS1O15524 211 aa15.59■□□□□ 0.09
UPF1-212ENST00000601689 IGHV3-43DP0DP04 118 aa15.59■□□□□ 0.09
UPF1-212ENST00000601689 HTD2P86397 168 aa15.59■□□□□ 0.09
UPF1-212ENST00000601689 STEAP3Q658P3 488 aa15.59■□□□□ 0.09
UPF1-212ENST00000601689 UBALD1Q8TB05 177 aa15.59■□□□□ 0.09
UPF1-212ENST00000601689 TAF15Q92804 592 aaKnown RBP eCLIP15.59■□□□□ 0.09
UPF1-212ENST00000601689 PTX4Q96A99 478 aa15.59■□□□□ 0.09
UPF1-212ENST00000601689 CMSS1Q9BQ75 279 aaKnown RBP15.59■□□□□ 0.09
UPF1-212ENST00000601689 OR51E2Q9H255 320 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms