RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 SPNS3Q6ZMD2 512 aa12.65□□□□□ -0.38
SYMPK-215ENST00000600237 TMEM191AQ9H0A3 160 aa12.65□□□□□ -0.38
SYMPK-215ENST00000600237 RAB1BQ9H0U4 201 aa12.65□□□□□ -0.38
SYMPK-215ENST00000600237 GPR132Q9UNW8 380 aa12.65□□□□□ -0.38
SYMPK-215ENST00000600237 M0R143 59 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 TMPRSS2O15393 492 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 ZNF205O95201 554 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 PTBP3O95758 552 aaKnown RBP12.64□□□□□ -0.39
SYMPK-215ENST00000600237 IGHV3-13P01766 116 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 IGHV3-7P01780 117 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 FAM87AP0C7U9 286 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 NPY1RP25929 384 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 LYZP61626 148 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 ELOBQ15370 118 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 SLC23A3Q6PIS1 610 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 SNX22Q96L94 193 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 BET1LQ9NYM9 111 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 SF3B6Q9Y3B4 125 aaKnown RBP12.64□□□□□ -0.39
SYMPK-215ENST00000600237 A0A0J9YW62 118 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 PAGE4O60829 102 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 NEURL1O76050 574 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 SFTPA2Q8IWL1 248 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 SLC25A40Q8TBP6 338 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 SLC25A38Q96DW6 304 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 GMPPAQ96IJ6 420 aaPredicted RBP12.64□□□□□ -0.39
SYMPK-215ENST00000600237 SVILO95425 2214 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 UPK3AO75631 287 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 GOSR1O95249 250 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 CD3EP07766 207 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 HLA-DRB5Q30154 266 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 LRP11Q86VZ4 500 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 ABHD14BQ96IU4 210 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 ZNF665Q9H7R5 613 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 TRBV5-7A0A0A0MS05 114 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 IGLV1-36A0A0B4J1U3 117 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 CXorf1O96002 111 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 MOGAT3Q86VF5 341 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 MS4A7Q9GZW8 240 aaPredicted RBP12.64□□□□□ -0.39
SYMPK-215ENST00000600237 GSX1Q9H4S2 264 aaPredicted RBP12.64□□□□□ -0.39
SYMPK-215ENST00000600237 CCDC88CQ9P219 2028 aa12.64□□□□□ -0.39
SYMPK-215ENST00000600237 SYNGR1O43759 233 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 HOXA6P31267 233 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 TGIF2LYQ8IUE0 185 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 TGIF2LXQ8IUE1 241 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 SSMEM1Q8WWF3 244 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 KCNK17Q96T54 332 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 NPAS1Q99742 590 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 COL11A1P12107 1806 aaPredicted RBP12.63□□□□□ -0.39
SYMPK-215ENST00000600237 ZNF638Q14966 1978 aaKnown RBP12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FTH1P19P0C7X4 201 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 PSG2P11465 335 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 G0S2P27469 103 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 TEPPQ6URK8 271 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 HDHD3Q9BSH5 251 aaPredicted RBP12.63□□□□□ -0.39
SYMPK-215ENST00000600237 IGSF23A1L1A6 192 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A10PA6NDY2 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A18PA6NE21 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A16PA6NEW6 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A20PA6NIJ5 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A8PA6NJQ4 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A7PA6NKC0 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A22PA8MWA6 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A12PA8MX19 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A5PA8MXJ8 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A23PA8MXZ1 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 TCAPO15273 167 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 OR4A8P0C604 315 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A15PP0C7V4 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A13PP0C7W8 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A14PP0C7W9 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 FAM90A24PP0C7X0 464 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 HIST3H3Q16695 136 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 SAP30LQ9HAJ7 183 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 PILRBQ9UKJ0 227 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 A0A087X0M5 115 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 A0A1B0GX30 115 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 SP9P0CG40 484 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 UNQ9370/PRO34162Q6UXP9 181 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 OR1B1Q8NGR6 318 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 DNASE2BQ8WZ79 361 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 RND1Q92730 232 aa12.63□□□□□ -0.39
SYMPK-215ENST00000600237 NUDT16L1Q9BRJ7 211 aaKnown RBP12.63□□□□□ -0.39
SYMPK-215ENST00000600237 SNCGO76070 127 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 SFTPCP11686 197 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 HIKESHIQ53FT3 197 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 ZNF660Q6AZW8 331 aaPredicted RBP12.62□□□□□ -0.39
SYMPK-215ENST00000600237 FGF11Q92914 225 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 PERPQ96FX8 193 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 C1RLQ9NZP8 487 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 DOCK3Q8IZD9 2030 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 OR2T8A6NH00 312 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 CBY3A6NI87 242 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 FAM157CP0CG43 387 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 FGF12P61328 243 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 C3AR1Q16581 482 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 CEACAM21Q3KPI0 293 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 OR1L8Q8NGR8 309 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 RAB24Q969Q5 203 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 SRD5A3Q9H8P0 318 aa12.62□□□□□ -0.39
SYMPK-215ENST00000600237 NPDC1Q9NQX5 325 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms