RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 FPR2P25090 351 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 PTBP1P26599 531 aaKnown RBP eCLIP10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 KIR2DS4P43632 304 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 LOXL3P58215 753 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 MRPS10P82664 201 aaKnown RBP10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 IL18Q14116 193 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 KIR2DS1Q14954 304 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 ZNF79Q15937 498 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 PRAMEF5Q5TYX0 476 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 HCP5Q6MZN7 132 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 FAM131AQ6UXB0 335 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 VMO1Q7Z5L0 202 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 HOGA1Q86XE5 327 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 MFSD4AQ8N468 514 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 GVQW1Q8N7I0 195 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 OR52M1Q8NGK5 317 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 SETD6Q8TBK2 473 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 SMIM4Q8WVI0 70 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 MAFIPQ8WZ33 124 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 IDI2-AS1Q9NZ38 188 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 SESN1Q9Y6P5 492 aa10.35□□□□□ -0.75
CHMP2A-206ENST00000600118 DOCK11Q5JSL3 2073 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 A0A087X0M5 115 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 IGKV1-6A0A0C4DH72 117 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 A0A1B0GX30 115 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 MEIS3P1A6NDR6 274 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 A8MV72 311 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 GABARAPH6UMI1 98 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 FABP7O15540 132 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 GSTZ1O43708 216 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 DIRAS3O95661 229 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 FSHBP01225 129 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 SCTP09683 121 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 CD34P28906 385 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 DLX1P56177 255 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 HTD2P86397 168 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 DGCR2P98153 550 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 HERPUD1Q15011 391 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 TMEM30BQ3MIR4 351 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 SPANXN2Q5MJ10 180 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 UTF1Q5T230 341 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 CLEC9AQ6UXN8 241 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 OR4A4PQ8NGN8 299 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 OR52I2Q8NH67 350 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 UBALD1Q8TB05 177 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 SNAPC3Q92966 411 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 PCGF1Q9BSM1 259 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 CABLES2Q9BTV7 478 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 ST6GALNAC5Q9BVH7 336 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 ZNF286AQ9HBT8 521 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 RAB9BQ9NP90 201 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 AKIP1Q9NQ31 210 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 SIRT7Q9NRC8 400 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 YAE1D1Q9NRH1 226 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 TMEM160Q9NX00 188 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 MTFP1Q9UDX5 166 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 ANXA10Q9UJ72 324 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 RBMX2Q9Y388 322 aaKnown RBP10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 F8P00451 2351 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 TLN2Q9Y4G6 2542 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 DSCAML1Q8TD84 2053 aa10.34□□□□□ -0.75
CHMP2A-206ENST00000600118 ANK3Q12955 4377 aaKnown RBP10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 RNASEK-C17orf49H0YIS7 233 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 GSTT2P0CG29 244 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 GSTT2BP0CG30 244 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 HOXB4P17483 251 aaPredicted RBP10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 PRB3Q04118 309 aaPredicted RBP10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 KLF17Q5JT82 389 aaPredicted RBP10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 NCR3LG1Q68D85 454 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 ZNF782Q6ZMW2 699 aaPredicted RBP10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 PRR18Q8N4B5 295 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 BEST4Q8NFU0 473 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 FCAMRQ8WWV6 532 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 GALMQ96C23 342 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 SRRQ9GZT4 340 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 TOLLIPQ9H0E2 274 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 TMEM133Q9H2Q1 129 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 GSX1Q9H4S2 264 aaPredicted RBP10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 GFOD1Q9NXC2 390 aa10.33□□□□□ -0.76
CHMP2A-206ENST00000600118 CENPVL3A0A0U1RRI6 287 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 SDCBPO00560 298 aaPredicted RBP10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 RCVRNP35243 200 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 ZNF45Q02386 682 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 SSBP1Q04837 148 aaKnown RBP10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 Q3ZCU0 254 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 LY6G6FQ5SQ64 297 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 STEAP3Q658P3 488 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 OR52W1Q6IF63 320 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 FAM53AQ6NSI3 398 aaPredicted RBP10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 LYSMD2Q8IV50 215 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 OR11H6Q8NGC7 330 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 OR52L2PQ8NGH6 319 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 SUCNR1Q9BXA5 334 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 HEXA-AS1Q9H8Q6 139 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 IFT46Q9NQC8 304 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 KLK11Q9UBX7 282 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 ZNF107Q9UII5 783 aaPredicted RBP10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 JPT1Q9UK76 154 aa10.32□□□□□ -0.76
CHMP2A-206ENST00000600118 TRBV6-7A0A0A0MS04 114 aa10.31□□□□□ -0.76
CHMP2A-206ENST00000600118 IGHV2-26A0A0B4J1V2 119 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms