RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 CDRT1O95170 752 aa13.76□□□□□ -0.21
HOMER3-210ENST00000599097 CDX1P47902 265 aaPredicted RBP13.76□□□□□ -0.21
HOMER3-210ENST00000599097 STEAP3Q658P3 488 aa13.76□□□□□ -0.21
HOMER3-210ENST00000599097 PACRGLQ8N7B6 248 aa13.76□□□□□ -0.21
HOMER3-210ENST00000599097 RTN4IP1Q8WWV3 396 aaPredicted RBP13.76□□□□□ -0.21
HOMER3-210ENST00000599097 SMIM19Q96E16 107 aa13.76□□□□□ -0.21
HOMER3-210ENST00000599097 VCX3BQ9H321 246 aa13.76□□□□□ -0.21
HOMER3-210ENST00000599097 FGF20Q9NP95 211 aaPredicted RBP13.76□□□□□ -0.21
HOMER3-210ENST00000599097 ZNF580Q9UK33 172 aa13.76□□□□□ -0.21
HOMER3-210ENST00000599097 GEMIN2O14893 280 aaKnown RBP13.75□□□□□ -0.21
HOMER3-210ENST00000599097 SOX6P35712 828 aa13.75□□□□□ -0.21
HOMER3-210ENST00000599097 REG1BP48304 166 aa13.75□□□□□ -0.21
HOMER3-210ENST00000599097 DIAPH2-AS1Q14236 149 aa13.75□□□□□ -0.21
HOMER3-210ENST00000599097 UTF1Q5T230 341 aa13.75□□□□□ -0.21
HOMER3-210ENST00000599097 ZNF497Q6ZNH5 498 aa13.75□□□□□ -0.21
HOMER3-210ENST00000599097 Q8N6K4 173 aa13.75□□□□□ -0.21
HOMER3-210ENST00000599097 TRAPPC2LQ9UL33 140 aa13.75□□□□□ -0.21
HOMER3-210ENST00000599097 EXOSC1Q9Y3B2 195 aaKnown RBP13.75□□□□□ -0.21
HOMER3-210ENST00000599097 FAM90A10PA6NDY2 464 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 FAM90A7PA6NKC0 464 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 FAM90A23PA8MXZ1 464 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 C15orf65H3BRN8 121 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 LIMS3P0CW19 117 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 LIMS4P0CW20 117 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 ZNF137PP52743 207 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 TAS2R43P59537 309 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 KIR2DS1Q14954 304 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 SLC22A6Q4U2R8 563 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 YIF1BQ5BJH7 314 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 C11orf87Q6NUJ2 197 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 ZNF554Q86TJ5 538 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 CDH26Q8IXH8 852 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 RNF152Q8N8N0 203 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 C4orf3Q8WVX3 66 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 RGP1Q92546 391 aaPredicted RBP13.74□□□□□ -0.21
HOMER3-210ENST00000599097 S1PR3Q99500 378 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 ZNF184Q99676 751 aaPredicted RBP13.74□□□□□ -0.21
HOMER3-210ENST00000599097 BABAM2Q9NXR7 383 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 LINC00527Q9UJ94 153 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 NBEAL2Q6ZNJ1 2754 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 COL7A1Q02388 2944 aa13.74□□□□□ -0.21
HOMER3-210ENST00000599097 IGHV3-72A0A0B4J1Y9 119 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 A0A1W2PPE3 182 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 ATP6V1G2O95670 118 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 GLAP06280 429 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 FSTP19883 344 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 INSL3P51460 131 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 GTF2A1P52655 376 aaPredicted RBP13.73□□□□□ -0.21
HOMER3-210ENST00000599097 Q499Y3 187 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 SLC25A48Q6ZT89 311 aaKnown RBP13.73□□□□□ -0.21
HOMER3-210ENST00000599097 Q8N9W7 124 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 RAX2Q96IS3 184 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 ETAA1Q9NY74 926 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 KCNIP1Q9NZI2 227 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 AASSQ9UDR5 926 aa13.73□□□□□ -0.21
HOMER3-210ENST00000599097 TRAV39A0A0B4J263 110 aa13.72□□□□□ -0.21
HOMER3-210ENST00000599097 GPX5O75715 221 aa13.72□□□□□ -0.21
HOMER3-210ENST00000599097 IGHG4P01861 327 aa13.72□□□□□ -0.21
HOMER3-210ENST00000599097 MT-ND4P03905 459 aa13.72□□□□□ -0.21
HOMER3-210ENST00000599097 RPLP1P05386 114 aaKnown RBP13.72□□□□□ -0.21
HOMER3-210ENST00000599097 OGFRL1Q5TC84 451 aaPredicted RBP13.72□□□□□ -0.21
HOMER3-210ENST00000599097 TMEM65Q6PI78 240 aa13.72□□□□□ -0.21
HOMER3-210ENST00000599097 TMEM104Q8NE00 496 aa13.72□□□□□ -0.21
HOMER3-210ENST00000599097 SETD9Q8NE22 299 aa13.72□□□□□ -0.21
HOMER3-210ENST00000599097 CCDC107Q8WV48 283 aa13.72□□□□□ -0.21
HOMER3-210ENST00000599097 ST6GALNAC6Q969X2 333 aa13.72□□□□□ -0.21
HOMER3-210ENST00000599097 SMPD3Q9NY59 655 aaPredicted RBP13.72□□□□□ -0.21
HOMER3-210ENST00000599097 RCC2Q9P258 522 aaKnown RBP13.72□□□□□ -0.21
HOMER3-210ENST00000599097 DIMT1Q9UNQ2 313 aaKnown RBP13.72□□□□□ -0.21
HOMER3-210ENST00000599097 MRPS28Q9Y2Q9 187 aaKnown RBP13.72□□□□□ -0.21
HOMER3-210ENST00000599097 OGG1O15527 345 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 LANCL1O43813 399 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 RGS11O94810 467 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 IGF1P05019 195 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 MAPK3P27361 379 aaPredicted RBP13.71□□□□□ -0.21
HOMER3-210ENST00000599097 SYT6Q5T7P8 510 aaPredicted RBP13.71□□□□□ -0.21
HOMER3-210ENST00000599097 RAB12Q6IQ22 244 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 LCNL1Q6ZST4 164 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 JAGN1Q8N5M9 183 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 FAM71E2Q8N5Q1 922 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 NKAIN3Q8N8D7 197 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 TFAP2CQ92754 450 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 ERGIC3Q9Y282 383 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 LRRC42Q9Y546 428 aa13.71□□□□□ -0.21
HOMER3-210ENST00000599097 TRBV5-5A0A0J9YX44 114 aa13.7□□□□□ -0.22
HOMER3-210ENST00000599097 SEC14L6B5MCN3 397 aa13.7□□□□□ -0.22
HOMER3-210ENST00000599097 C12orf77C9JDV5 145 aa13.7□□□□□ -0.22
HOMER3-210ENST00000599097 OR8U8P0C7N1 319 aa13.7□□□□□ -0.22
HOMER3-210ENST00000599097 IGFBP3P17936 291 aaPredicted RBP13.7□□□□□ -0.22
HOMER3-210ENST00000599097 ETV1P50549 477 aa13.7□□□□□ -0.22
HOMER3-210ENST00000599097 MMDQ15546 238 aa13.7□□□□□ -0.22
HOMER3-210ENST00000599097 AWAT2Q6E213 333 aa13.7□□□□□ -0.22
HOMER3-210ENST00000599097 C18orf65Q6ZTR6 163 aa13.7□□□□□ -0.22
HOMER3-210ENST00000599097 APH1BQ8WW43 257 aa13.7□□□□□ -0.22
HOMER3-210ENST00000599097 GHSRQ92847 366 aa13.7□□□□□ -0.22
HOMER3-210ENST00000599097 GHRLQ9UBU3 117 aa13.7□□□□□ -0.22
HOMER3-210ENST00000599097 ZNF107Q9UII5 783 aaPredicted RBP13.7□□□□□ -0.22
HOMER3-210ENST00000599097 IGHV3-43A0A0B4J1X8 118 aa13.69□□□□□ -0.22
HOMER3-210ENST00000599097 HBZP02008 142 aa13.69□□□□□ -0.22
HOMER3-210ENST00000599097 IGHV3-43DP0DP04 118 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms