RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 RANBP1P43487 201 aa13.46□□□□□ -0.25
SSBP4-204ENST00000597724 LOXL3P58215 753 aa13.46□□□□□ -0.25
SSBP4-204ENST00000597724 C2orf76Q3KRA6 126 aa13.46□□□□□ -0.25
SSBP4-204ENST00000597724 C6orf183Q5T699 404 aa13.46□□□□□ -0.25
SSBP4-204ENST00000597724 TPTE2P1Q5T6R2 138 aa13.46□□□□□ -0.25
SSBP4-204ENST00000597724 C6orf201Q7Z4U5 140 aa13.46□□□□□ -0.25
SSBP4-204ENST00000597724 UBALD1Q8TB05 177 aa13.46□□□□□ -0.25
SSBP4-204ENST00000597724 URM1Q9BTM9 101 aaKnown RBP13.46□□□□□ -0.25
SSBP4-204ENST00000597724 FAAP24Q9BTP7 215 aa13.46□□□□□ -0.25
SSBP4-204ENST00000597724 MBNL3Q9NUK0 354 aaKnown RBP13.46□□□□□ -0.25
SSBP4-204ENST00000597724 TXNL4BQ9NX01 149 aaKnown RBP13.46□□□□□ -0.25
SSBP4-204ENST00000597724 FBLN5Q9UBX5 448 aa13.46□□□□□ -0.25
SSBP4-204ENST00000597724 STEAP1Q9UHE8 339 aa13.46□□□□□ -0.25
SSBP4-204ENST00000597724 PITPNC1Q9UKF7 332 aa13.46□□□□□ -0.25
SSBP4-204ENST00000597724 OOSP1A8MZH6 123 aa13.45□□□□□ -0.26
SSBP4-204ENST00000597724 SDCBPO00560 298 aaPredicted RBP13.45□□□□□ -0.26
SSBP4-204ENST00000597724 LDLRAD4O15165 306 aa13.45□□□□□ -0.26
SSBP4-204ENST00000597724 SPINT2O43291 252 aa13.45□□□□□ -0.26
SSBP4-204ENST00000597724 RAB3BP20337 219 aa13.45□□□□□ -0.26
SSBP4-204ENST00000597724 BLVRBP30043 206 aaPredicted RBP13.45□□□□□ -0.26
SSBP4-204ENST00000597724 OR10A3P58181 314 aa13.45□□□□□ -0.26
SSBP4-204ENST00000597724 HES5Q5TA89 166 aa13.45□□□□□ -0.26
SSBP4-204ENST00000597724 TRAT1Q6PIZ9 186 aa13.45□□□□□ -0.26
SSBP4-204ENST00000597724 MRPL30Q8TCC3 161 aaKnown RBP13.45□□□□□ -0.26
SSBP4-204ENST00000597724 WFDC12Q8WWY7 111 aa13.45□□□□□ -0.26
SSBP4-204ENST00000597724 RAB9BQ9NP90 201 aa13.45□□□□□ -0.26
SSBP4-204ENST00000597724 STUB1Q9UNE7 303 aa13.45□□□□□ -0.26
SSBP4-204ENST00000597724 AMMECR1Q9Y4X0 333 aaPredicted RBP13.45□□□□□ -0.26
SSBP4-204ENST00000597724 IFITM5A6NNB3 132 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 FOXI3A8MTJ6 420 aaPredicted RBP13.44□□□□□ -0.26
SSBP4-204ENST00000597724 SOCS1O15524 211 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 BRS3P32247 399 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 KIR2DS4P43632 304 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 GNG10P50151 68 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 ARHGDIBP52566 201 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 PROK1P58294 105 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 NEDD8Q15843 81 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 ZNF554Q86TJ5 538 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 NR2C2APQ86WQ0 139 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 TMEM219Q86XT9 240 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 C8orf31Q8N9H6 132 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 OR1L1Q8NH94 360 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 RANBP3Q9H6Z4 567 aaPredicted RBP13.44□□□□□ -0.26
SSBP4-204ENST00000597724 TAF9BQ9HBM6 251 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 PLEKHJ1Q9NW61 149 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 GFOD1Q9NXC2 390 aa13.44□□□□□ -0.26
SSBP4-204ENST00000597724 NBEAL1Q6ZS30 2694 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 IGHV3-43A0A0B4J1X8 118 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 TMEM272A0A1B0GTI8 110 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 A0A1W2PPE3 182 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 NAPSAO96009 420 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 HBZP02008 142 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 IGHV3-43DP0DP04 118 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 TMEM50BP56557 158 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 KRTAP10-3P60369 221 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 MADCAM1Q13477 382 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 TMEM30BQ3MIR4 351 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 Q3ZCU0 254 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 FAM53AQ6NSI3 398 aaPredicted RBP13.43□□□□□ -0.26
SSBP4-204ENST00000597724 CCDC144NLQ6NUI1 221 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 LINC00311Q8N616 119 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 OR4C13Q8NGP0 309 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 NPFFR1Q9GZQ6 430 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 OR51E2Q9H255 320 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 HSF4Q9ULV5 492 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 SSR3Q9UNL2 185 aa13.43□□□□□ -0.26
SSBP4-204ENST00000597724 TNFAIP8O95379 198 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 CD24P25063 80 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 MNDAP41218 407 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 VEGFCP49767 419 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 SRSF4Q08170 494 aaKnown RBP13.42□□□□□ -0.26
SSBP4-204ENST00000597724 PLA2G7Q13093 441 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 C5orf24Q7Z6I8 188 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 TPRA1Q86W33 373 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 PRR18Q8N4B5 295 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 OR10X1Q8NGY0 326 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 SGMS2Q8NHU3 365 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 TOMM40LQ969M1 308 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 RPEQ96AT9 228 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 OCSTAMPQ9BR26 566 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 KCNIP1Q9NZI2 227 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 RAB22AQ9UL26 194 aa13.42□□□□□ -0.26
SSBP4-204ENST00000597724 CD36P16671 472 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 DIAPH2-AS1Q14236 149 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 ZNF880Q6PDB4 577 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 Q6ZPA2 131 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 DTX3Q8N9I9 347 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 ZNF439Q8NDP4 499 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 TSPAN14Q8NG11 270 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 OR56B1Q8NGI3 324 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 CITED1Q99966 193 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 RIMS4Q9H426 269 aaPredicted RBP13.41□□□□□ -0.26
SSBP4-204ENST00000597724 LIN7BQ9HAP6 207 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 GNG12Q9UBI6 72 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 SIGLEC9Q9Y336 463 aa13.41□□□□□ -0.26
SSBP4-204ENST00000597724 A0A087WXM4 84 aa13.4□□□□□ -0.26
SSBP4-204ENST00000597724 A0A1W2PPI3 338 aa13.4□□□□□ -0.26
SSBP4-204ENST00000597724 FAM90A9PA6NNJ1 464 aa13.4□□□□□ -0.26
SSBP4-204ENST00000597724 RRP9O43818 475 aaKnown RBP13.4□□□□□ -0.26
SSBP4-204ENST00000597724 GADD45AP24522 165 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms