RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 EFNB1P98172 346 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 MS4A2Q01362 244 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 ECSCRQ19T08 205 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 PIGYQ3MUY2 71 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 TP53I3Q53FA7 332 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 PYHIN1Q6K0P9 492 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 SUMF2Q8NBJ7 301 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 PXT1Q8NFP0 134 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 ASB9Q96DX5 294 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 CPNE2Q96FN4 548 aaPredicted RBP7.76□□□□□ -1.17
TRIM28-210ENST00000597618 IL4I1Q96RQ9 567 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 FAM110AQ9BQ89 295 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 ZNF251Q9BRH9 671 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 TMED9Q9BVK6 235 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 HIPK2Q9H2X6 1198 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 KIAA1456Q9P272 454 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 IGHV3-43A0A0B4J1X8 118 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 SLC31A2O15432 143 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 NBR2O15453 112 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 SULT1B1O43704 296 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 LANCL1O43813 399 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 ORC5O43913 435 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 SOX15O60248 233 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 SNX3O60493 162 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 IGHV3-11P01762 117 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 IGHV3-43DP0DP04 118 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 CRIP2P52943 208 aaPredicted RBP7.75□□□□□ -1.17
TRIM28-210ENST00000597618 ACTBP60709 375 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 ZSCAN26Q16670 478 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 C5orf64Q2M2E5 130 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 TMEM30BQ3MIR4 351 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 C19orf54Q5BKX5 351 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 ZNF691Q5VV52 312 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 RNLSQ5VYX0 342 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 C12orf73Q69YU5 71 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 LIN54Q6MZP7 749 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 ZNF439Q8NDP4 499 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 OR51A4Q8NGJ6 313 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 OR10AC1Q8NH08 325 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 UBALD1Q8TB05 177 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 CANT1Q8WVQ1 401 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 CCDC124Q96CT7 223 aaKnown RBP7.75□□□□□ -1.17
TRIM28-210ENST00000597618 RBMXL1Q96E39 390 aaKnown RBP7.75□□□□□ -1.17
TRIM28-210ENST00000597618 ANKRD60Q9BZ19 345 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 FAM107BQ9H098 131 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 IFT22Q9H7X7 185 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 RAB9BQ9NP90 201 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 FRRS1LQ9P0K9 344 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 GNG12Q9UBI6 72 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 CEPT1Q9Y6K0 416 aa7.75□□□□□ -1.17
TRIM28-210ENST00000597618 AQP12BA6NM10 295 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 OR7C1O76099 320 aaPredicted RBP7.74□□□□□ -1.17
TRIM28-210ENST00000597618 RGS11O94810 467 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 ZP3P21754 424 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 CCR9P51686 369 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 NDPQ00604 133 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 ZNF85Q03923 595 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 RAB40BQ12829 278 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 RSU1Q15404 277 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 LCN12Q6JVE5 192 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 FDX2Q6P4F2 183 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 AQP12AQ8IXF9 295 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 OR5D14Q8NGL3 314 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 CASTOR1Q8WTX7 329 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 TNFAIP8L1Q8WVP5 186 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 NRBF2Q96F24 287 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 THAP7Q9BT49 309 aaPredicted RBP7.74□□□□□ -1.17
TRIM28-210ENST00000597618 FAM192AQ9GZU8 254 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 DHDHQ9UQ10 334 aa7.74□□□□□ -1.17
TRIM28-210ENST00000597618 SHISA3A0PJX4 238 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 ZAR1LA6NP61 321 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 B2RBV5 119 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 AIPO00170 330 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 SPINT2O43291 252 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 HTR1AP08908 422 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 CD40LGP29965 261 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 DAPP51397 102 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 ZNF134P52741 427 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 TPPP2P59282 170 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 NANOS3P60323 173 aaKnown RBP7.73□□□□□ -1.17
TRIM28-210ENST00000597618 TMEM267Q0VDI3 215 aaPredicted RBP7.73□□□□□ -1.17
TRIM28-210ENST00000597618 TMED1Q13445 227 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 LRRC36Q1X8D7 754 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 HSP90B2PQ58FF3 399 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 CT45A1Q5HYN5 189 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 NHLRC3Q5JS37 347 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 LPCAT4Q643R3 524 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 STEAP3Q658P3 488 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 ZNF660Q6AZW8 331 aaPredicted RBP7.73□□□□□ -1.17
TRIM28-210ENST00000597618 KCTD20Q7Z5Y7 419 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 LINC00596Q86U02 117 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 SERPINA12Q8IW75 414 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 NPBQ8NG41 125 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 OR10V1Q8NGI7 309 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 CT45A3Q8NHU0 189 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 CCDC107Q8WV48 283 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 TMEM106AQ96A25 262 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 GPER1Q99527 375 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 SLA2Q9H6Q3 261 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 RANGRFQ9HD47 186 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms