RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 SYT6Q5T7P8 510 aaPredicted RBP12.77□□□□□ -0.37
IRF3-210ENST00000595240 LIPKQ5VXJ0 399 aa12.77□□□□□ -0.37
IRF3-210ENST00000595240 FAM53AQ6NSI3 398 aaPredicted RBP12.77□□□□□ -0.37
IRF3-210ENST00000595240 CEACAM19Q7Z692 300 aa12.77□□□□□ -0.37
IRF3-210ENST00000595240 NDUFA11Q86Y39 141 aa12.77□□□□□ -0.37
IRF3-210ENST00000595240 LYG1Q8N1E2 194 aa12.77□□□□□ -0.37
IRF3-210ENST00000595240 LINC00311Q8N616 119 aa12.77□□□□□ -0.37
IRF3-210ENST00000595240 UFD1Q92890 307 aa12.77□□□□□ -0.37
IRF3-210ENST00000595240 FAM46BQ96A09 425 aa12.77□□□□□ -0.37
IRF3-210ENST00000595240 CITED2Q99967 270 aaPredicted RBP12.77□□□□□ -0.37
IRF3-210ENST00000595240 CST11Q9H112 138 aa12.77□□□□□ -0.37
IRF3-210ENST00000595240 VCX3BQ9H321 246 aa12.77□□□□□ -0.37
IRF3-210ENST00000595240 TRAPPC2LQ9UL33 140 aa12.77□□□□□ -0.37
IRF3-210ENST00000595240 ERICH4A6NGS2 130 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 ADARB2-AS1A8MUL3 147 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 RGS10O43665 173 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 PDCD6O75340 191 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 LPLP06858 475 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 SRMP19623 302 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 TMEM30BQ3MIR4 351 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 Q3ZCU0 254 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 HSD17B12Q53GQ0 312 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 RBM48Q5RL73 367 aaKnown RBP12.76□□□□□ -0.37
IRF3-210ENST00000595240 GLT8D1Q68CQ7 371 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 OR4K15Q8NH41 348 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 CYYR1Q96J86 154 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 ISYNA1Q9NPH2 558 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 MOB4Q9Y3A3 225 aa12.76□□□□□ -0.37
IRF3-210ENST00000595240 SH2D7A6NKC9 451 aaPredicted RBP12.75□□□□□ -0.37
IRF3-210ENST00000595240 CCRL2O00421 344 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 HSD17B6O14756 317 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 SPINT2O43291 252 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 MPIG6BO95866 241 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 VSIG8P0DPA2 414 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 RCC1P18754 421 aaPredicted RBP12.75□□□□□ -0.37
IRF3-210ENST00000595240 HSPA13P48723 471 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 EMX1Q04741 257 aaPredicted RBP12.75□□□□□ -0.37
IRF3-210ENST00000595240 ZNF816Q0VGE8 651 aaPredicted RBP12.75□□□□□ -0.37
IRF3-210ENST00000595240 NSUN5P1Q3KNT7 163 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 PDLIM3Q53GG5 364 aaPredicted RBP12.75□□□□□ -0.37
IRF3-210ENST00000595240 C6orf183Q5T699 404 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 TRAT1Q6PIZ9 186 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 IZUMO2Q6UXV1 221 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 PRSS48Q7RTY5 328 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 OR5AU1Q8NGC0 362 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 TMEM203Q969S6 136 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 ST6GALNAC6Q969X2 333 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 RAB9BQ9NP90 201 aa12.75□□□□□ -0.37
IRF3-210ENST00000595240 MBNL3Q9NUK0 354 aaKnown RBP12.75□□□□□ -0.37
IRF3-210ENST00000595240 IGHV3-43A0A0B4J1X8 118 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 UBE2QL1A1L167 161 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 SLC22A1O15245 554 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 HBZP02008 142 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 GAPDHP04406 335 aaKnown RBP12.74□□□□□ -0.37
IRF3-210ENST00000595240 HSMCR30P0CW71 290 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 IGHV3-43DP0DP04 118 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 CPEP16870 476 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 QRFPP83859 136 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 CD83Q01151 205 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 MLLT11Q13015 90 aaPredicted RBP12.74□□□□□ -0.37
IRF3-210ENST00000595240 OR10K2Q6IF99 312 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 TMEM91Q6ZNR0 172 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 ZNF439Q8NDP4 499 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 OR1L1Q8NH94 360 aa12.74□□□□□ -0.37
IRF3-210ENST00000595240 IGHV1-3A0A0C4DH29 117 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 SLC31A2O15432 143 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 IGKV1D-33P01593 117 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 IGKV1-33P01594 117 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 TMEM11P17152 192 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 CHATP28329 748 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 HTR2CP28335 458 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 REG1BP48304 166 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 ZNF137PP52743 207 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 RPS25P62851 125 aaKnown RBP12.73□□□□□ -0.37
IRF3-210ENST00000595240 RPS27AP62979 156 aaKnown RBP12.73□□□□□ -0.37
IRF3-210ENST00000595240 UNC119Q13432 240 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 EBI3Q14213 229 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 HES1Q14469 280 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 TRAM1Q15629 374 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 TCTEX1D4Q5JR98 221 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 SLC25A48Q6ZT89 311 aaKnown RBP12.73□□□□□ -0.37
IRF3-210ENST00000595240 CENPVQ7Z7K6 275 aaPredicted RBP12.73□□□□□ -0.37
IRF3-210ENST00000595240 ZNF554Q86TJ5 538 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 C1QL4Q86Z23 238 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 IZUMO1Q8IYV9 350 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 PRR18Q8N4B5 295 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 C5orf56Q8N8D9 126 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 OR6M1Q8NGM8 313 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 KCNG3Q8TAE7 436 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 MRPL30Q8TCC3 161 aaKnown RBP12.73□□□□□ -0.37
IRF3-210ENST00000595240 TM2D1Q9BX74 207 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 TMEM59Q9BXS4 323 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 CCDC90BQ9GZT6 254 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 TAF9BQ9HBM6 251 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 GNG12Q9UBI6 72 aa12.73□□□□□ -0.37
IRF3-210ENST00000595240 TMEM14DPA8MWL7 114 aa12.72□□□□□ -0.37
IRF3-210ENST00000595240 FGF16O43320 207 aa12.72□□□□□ -0.37
IRF3-210ENST00000595240 PSMA1P25786 263 aaKnown RBP12.72□□□□□ -0.37
IRF3-210ENST00000595240 IL3RAP26951 378 aa12.72□□□□□ -0.37
IRF3-210ENST00000595240 MAP2K4P45985 399 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms