RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CLEC4MQ9H2X3 399 aaPredicted RBP12.64□□□□□ -0.39
VRK3-207ENST00000594092 PLEKHF2Q9H8W4 249 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 DLL4Q9NR61 685 aa12.64□□□□□ -0.39
VRK3-207ENST00000594092 GOSR2O14653 212 aa12.63□□□□□ -0.39
VRK3-207ENST00000594092 ZNF728P0DKX0 622 aa12.63□□□□□ -0.39
VRK3-207ENST00000594092 NFYAP23511 347 aaPredicted RBP12.63□□□□□ -0.39
VRK3-207ENST00000594092 MRPS11P82912 194 aaKnown RBP12.63□□□□□ -0.39
VRK3-207ENST00000594092 HMGN3Q15651 99 aa12.63□□□□□ -0.39
VRK3-207ENST00000594092 C11orf88Q6PI97 169 aa12.63□□□□□ -0.39
VRK3-207ENST00000594092 MOB3AQ96BX8 217 aa12.63□□□□□ -0.39
VRK3-207ENST00000594092 CABLES2Q9BTV7 478 aa12.63□□□□□ -0.39
VRK3-207ENST00000594092 FAM234AQ9H0X4 552 aa12.63□□□□□ -0.39
VRK3-207ENST00000594092 TAF9BQ9HBM6 251 aa12.63□□□□□ -0.39
VRK3-207ENST00000594092 SLC23A1Q9UHI7 598 aa12.63□□□□□ -0.39
VRK3-207ENST00000594092 PCDHB10Q9UN67 800 aa12.63□□□□□ -0.39
VRK3-207ENST00000594092 KIAA2026Q5HYC2 2103 aa12.63□□□□□ -0.39
VRK3-207ENST00000594092 UTP20O75691 2785 aaKnown RBP12.63□□□□□ -0.39
VRK3-207ENST00000594092 ODAMA1E959 279 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 SMLR1H3BR10 107 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 J3QKU1 62 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 TMPRSS2O15393 492 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 SLC22A5O76082 557 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 DUS4LO95620 317 aaKnown RBP12.62□□□□□ -0.39
VRK3-207ENST00000594092 PPYP01298 95 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 AADACP22760 399 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 UCP3P55916 312 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 P2RX3P56373 397 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 SP5Q6BEB4 398 aaPredicted RBP12.62□□□□□ -0.39
VRK3-207ENST00000594092 NLRC3Q7RTR2 1065 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 OR13A1Q8NGR1 328 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 CASTOR1Q8WTX7 329 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 MITD1Q8WV92 249 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 KIRREL1Q96J84 757 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 TMEM246Q9BRR3 403 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 CHIAQ9BZP6 476 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 USF3Q68DE3 2245 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 FAM172BPA6NC97 362 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 C12orf77C9JDV5 145 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 SFT2D2O95562 160 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 GIPP09681 153 aaPredicted RBP12.62□□□□□ -0.39
VRK3-207ENST00000594092 COX6B1P14854 86 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 DAOP14920 347 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 ERP29P30040 261 aaKnown RBP12.62□□□□□ -0.39
VRK3-207ENST00000594092 GZMKP49863 264 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 C6orf183Q5T699 404 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 LYPD2Q6UXB3 125 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 SLC38A6Q8IZM9 456 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 PRR18Q8N4B5 295 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 UBALD1Q8TB05 177 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 MRGPRDQ8TDS7 321 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 DCTN5Q9BTE1 182 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 RANBP3Q9H6Z4 567 aaPredicted RBP12.62□□□□□ -0.39
VRK3-207ENST00000594092 KCNIP1Q9NZI2 227 aa12.62□□□□□ -0.39
VRK3-207ENST00000594092 TRBV6-7A0A0A0MS04 114 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 ADAM20O43506 726 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 FSTL3O95633 263 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 IGHV2-70P01814 119 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 EDDM3BP56851 147 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 KCNJ8Q15842 424 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 ABCA11PQ4W5N1 156 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 LIN54Q6MZP7 749 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 LPCAT3Q6P1A2 487 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 FGFRL1Q8N441 504 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 OR10J5Q8NHC4 309 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 IL1F10Q8WWZ1 152 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 NCOR1P1Q9H4R4 102 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 AKAP6Q13023 2319 aa12.61□□□□□ -0.39
VRK3-207ENST00000594092 MEX3AA1L020 520 aaKnown RBP12.6□□□□□ -0.39
VRK3-207ENST00000594092 OVOL3O00110 214 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 NDUFA2O43678 99 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 FCN3O75636 299 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 OR2A4O95047 310 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 RAP2BP61225 183 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 C2orf68Q2NKX9 166 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 SGPP2Q8IWX5 399 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 OR1L1Q8NH94 360 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 COQ8AQ8NI60 647 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 IGFBPL1Q8WX77 278 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 ASB13Q8WXK3 278 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 LURAP1Q96LR2 239 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 HYLS1Q96M11 299 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 OR2A7Q96R45 310 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 KAAG1Q9UBP8 84 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 NPIPB11E5RHQ5 1161 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 NDUFS7O75251 213 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 TUSC2O75896 110 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 SIX6O95475 246 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 F12P00748 615 aaPredicted RBP12.6□□□□□ -0.39
VRK3-207ENST00000594092 HBZP02008 142 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 PIGPP57054 158 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 SUPT4H1P63272 117 aaKnown RBP12.6□□□□□ -0.39
VRK3-207ENST00000594092 SLC9A3R2Q15599 337 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 CR1LQ2VPA4 569 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 TRAT1Q6PIZ9 186 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 OR2T35Q8NGX2 323 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 ZNF486Q96H40 463 aaPredicted RBP12.6□□□□□ -0.39
VRK3-207ENST00000594092 RSRP1Q9BUV0 290 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 OR1A1Q9P1Q5 309 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 CTSZQ9UBR2 303 aa12.6□□□□□ -0.39
VRK3-207ENST00000594092 SLC25A10Q9UBX3 287 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms