RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 AIPO00170 330 aa14.87□□□□□ -0.03
CCDC43-205ENST00000592333 TAS2R43P59537 309 aa14.87□□□□□ -0.03
CCDC43-205ENST00000592333 SMN1Q16637 294 aaKnown RBP14.87□□□□□ -0.03
CCDC43-205ENST00000592333 C6orf183Q5T699 404 aa14.87□□□□□ -0.03
CCDC43-205ENST00000592333 TTC23Q5W5X9 447 aa14.87□□□□□ -0.03
CCDC43-205ENST00000592333 UNQ9370/PRO34162Q6UXP9 181 aa14.87□□□□□ -0.03
CCDC43-205ENST00000592333 ZNF554Q86TJ5 538 aa14.87□□□□□ -0.03
CCDC43-205ENST00000592333 RNF152Q8N8N0 203 aa14.87□□□□□ -0.03
CCDC43-205ENST00000592333 SETD9Q8NE22 299 aa14.87□□□□□ -0.03
CCDC43-205ENST00000592333 RTN4IP1Q8WWV3 396 aaPredicted RBP14.87□□□□□ -0.03
CCDC43-205ENST00000592333 TMEM80Q96HE8 168 aa14.87□□□□□ -0.03
CCDC43-205ENST00000592333 CHCHD6Q9BRQ6 235 aa14.87□□□□□ -0.03
CCDC43-205ENST00000592333 TRAV39A0A0B4J263 110 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 NCBP2LA6PVI3 153 aaKnown RBP14.86□□□□□ -0.03
CCDC43-205ENST00000592333 NUDT19A8MXV4 375 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 SPINT2O43291 252 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 RRP9O43818 475 aaKnown RBP14.86□□□□□ -0.03
CCDC43-205ENST00000592333 MOSP00540 346 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 CD1AP06126 327 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 ELANEP08246 267 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 GPR12P47775 334 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 SLC22A6Q4U2R8 563 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 DEFB121Q5J5C9 76 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 SLC25A48Q6ZT89 311 aaKnown RBP14.86□□□□□ -0.03
CCDC43-205ENST00000592333 Q8N9W7 124 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 NEK7Q8TDX7 302 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 THRSPQ92748 146 aa14.86□□□□□ -0.03
CCDC43-205ENST00000592333 SIRT4Q9Y6E7 314 aaPredicted RBP14.86□□□□□ -0.03
CCDC43-205ENST00000592333 A0A1W2PPE3 182 aa14.85□□□□□ -0.03
CCDC43-205ENST00000592333 WI2-2373I1.2A0A1W2PRP0 233 aa14.85□□□□□ -0.03
CCDC43-205ENST00000592333 RAMP3O60896 148 aa14.85□□□□□ -0.03
CCDC43-205ENST00000592333 SC5DO75845 299 aa14.85□□□□□ -0.03
CCDC43-205ENST00000592333 CDX1P47902 265 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-205ENST00000592333 RPS11P62280 158 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCDC43-205ENST00000592333 FOXE3Q13461 319 aa14.85□□□□□ -0.03
CCDC43-205ENST00000592333 C8orf86Q6ZUL3 223 aa14.85□□□□□ -0.03
CCDC43-205ENST00000592333 ZNF485Q8NCK3 441 aa14.85□□□□□ -0.03
CCDC43-205ENST00000592333 ZNF439Q8NDP4 499 aa14.85□□□□□ -0.03
CCDC43-205ENST00000592333 KLHL30-AS1Q8NEE0 82 aa14.85□□□□□ -0.03
CCDC43-205ENST00000592333 PLSCR3Q9NRY6 295 aa14.85□□□□□ -0.03
CCDC43-205ENST00000592333 ZNF581Q9P0T4 197 aa14.85□□□□□ -0.03
CCDC43-205ENST00000592333 OR5H8P0DN80 308 aa14.84□□□□□ -0.03
CCDC43-205ENST00000592333 KIR2DS1Q14954 304 aa14.84□□□□□ -0.03
CCDC43-205ENST00000592333 CXorf66Q5JRM2 361 aaPredicted RBP14.84□□□□□ -0.03
CCDC43-205ENST00000592333 PACRGLQ8N7B6 248 aa14.84□□□□□ -0.03
CCDC43-205ENST00000592333 OR8U1Q8NH10 309 aa14.84□□□□□ -0.03
CCDC43-205ENST00000592333 PGLYRP3Q96LB9 341 aa14.84□□□□□ -0.03
CCDC43-205ENST00000592333 S1PR3Q99500 378 aa14.84□□□□□ -0.03
CCDC43-205ENST00000592333 B9D2Q9BPU9 175 aa14.84□□□□□ -0.03
CCDC43-205ENST00000592333 RASL11BQ9BPW5 248 aa14.84□□□□□ -0.03
CCDC43-205ENST00000592333 GHRLQ9UBU3 117 aa14.84□□□□□ -0.03
CCDC43-205ENST00000592333 TRAPPC2LQ9UL33 140 aa14.84□□□□□ -0.03
CCDC43-205ENST00000592333 MRPS28Q9Y2Q9 187 aaKnown RBP14.84□□□□□ -0.03
CCDC43-205ENST00000592333 COL7A1Q02388 2944 aa14.84□□□□□ -0.03
CCDC43-205ENST00000592333 TRBV5-7A0A0A0MS05 114 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 C12orf77C9JDV5 145 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 LALBAP00709 142 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 IGF1P05019 195 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 HOXD3P31249 432 aaPredicted RBP14.83□□□□□ -0.04
CCDC43-205ENST00000592333 REG1BP48304 166 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 GPR50Q13585 617 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 SYT6Q5T7P8 510 aaPredicted RBP14.83□□□□□ -0.04
CCDC43-205ENST00000592333 GLIPR1L1Q6UWM5 242 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 FAM71E2Q8N5Q1 922 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 NKAIN3Q8N8D7 197 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 CCDC107Q8WV48 283 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 DCLRE1BQ9H816 532 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.83□□□□□ -0.04
CCDC43-205ENST00000592333 ETAA1Q9NY74 926 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 CNOT2Q9NZN8 540 aaKnown RBP14.83□□□□□ -0.04
CCDC43-205ENST00000592333 GNG12Q9UBI6 72 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 LINC00527Q9UJ94 153 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 LRRC42Q9Y546 428 aa14.83□□□□□ -0.04
CCDC43-205ENST00000592333 CCL24O00175 119 aa14.82□□□□□ -0.04
CCDC43-205ENST00000592333 EBAG9O00559 213 aa14.82□□□□□ -0.04
CCDC43-205ENST00000592333 LANCL1O43813 399 aa14.82□□□□□ -0.04
CCDC43-205ENST00000592333 IGHG4P01861 327 aa14.82□□□□□ -0.04
CCDC43-205ENST00000592333 FUT3P21217 361 aa14.82□□□□□ -0.04
CCDC43-205ENST00000592333 DGCR2P98153 550 aa14.82□□□□□ -0.04
CCDC43-205ENST00000592333 DOC2BQ14184 412 aa14.82□□□□□ -0.04
CCDC43-205ENST00000592333 LY6G6FQ5SQ64 297 aa14.82□□□□□ -0.04
CCDC43-205ENST00000592333 RAB12Q6IQ22 244 aa14.82□□□□□ -0.04
CCDC43-205ENST00000592333 UQCC2Q9BRT2 126 aa14.82□□□□□ -0.04
CCDC43-205ENST00000592333 MBNL3Q9NUK0 354 aaKnown RBP14.82□□□□□ -0.04
CCDC43-205ENST00000592333 CLEC2DQ9UHP7 191 aa14.82□□□□□ -0.04
CCDC43-205ENST00000592333 TRAV8-7A0A075B6U6 113 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 IGHV3-72A0A0B4J1Y9 119 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 A0A1W2PP11 408 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 EFCAB10A6NFE3 127 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 LINC01548A6NM66 108 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 BAG2O95816 211 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 MAPK3P27361 379 aaPredicted RBP14.81□□□□□ -0.04
CCDC43-205ENST00000592333 SOX6P35712 828 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 CAPGP40121 348 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 VHLP40337 213 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 CD69Q07108 199 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 ST3GAL4Q11206 333 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 CT45A1Q5HYN5 189 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 AWAT2Q6E213 333 aa14.81□□□□□ -0.04
CCDC43-205ENST00000592333 LYPD6Q86Y78 171 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms