RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 IGFBP3P17936 291 aaPredicted RBP17.09■□□□□ 0.33
DDX39A-215ENST00000590696 DGCR2P98153 550 aa17.09■□□□□ 0.33
DDX39A-215ENST00000590696 DCTN2Q13561 401 aaKnown RBP17.09■□□□□ 0.33
DDX39A-215ENST00000590696 GPR50Q13585 617 aa17.09■□□□□ 0.33
DDX39A-215ENST00000590696 STX19Q8N4C7 294 aa17.09■□□□□ 0.33
DDX39A-215ENST00000590696 TFAP2CQ92754 450 aa17.09■□□□□ 0.33
DDX39A-215ENST00000590696 SMIM19Q96E16 107 aa17.09■□□□□ 0.33
DDX39A-215ENST00000590696 S1PR3Q99500 378 aa17.09■□□□□ 0.33
DDX39A-215ENST00000590696 RASL11BQ9BPW5 248 aa17.09■□□□□ 0.33
DDX39A-215ENST00000590696 S100A14Q9HCY8 104 aa17.09■□□□□ 0.33
DDX39A-215ENST00000590696 PLSCR3Q9NRY6 295 aa17.09■□□□□ 0.33
DDX39A-215ENST00000590696 NBEAL2Q6ZNJ1 2754 aa17.09■□□□□ 0.33
DDX39A-215ENST00000590696 SLC31A2O15432 143 aa17.08■□□□□ 0.32
DDX39A-215ENST00000590696 LALBAP00709 142 aa17.08■□□□□ 0.32
DDX39A-215ENST00000590696 DEFB136Q30KP8 78 aa17.08■□□□□ 0.32
DDX39A-215ENST00000590696 CXorf66Q5JRM2 361 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-215ENST00000590696 PQLC1Q8N2U9 271 aa17.08■□□□□ 0.32
DDX39A-215ENST00000590696 ZNF555Q8NEP9 628 aa17.08■□□□□ 0.32
DDX39A-215ENST00000590696 GHSRQ92847 366 aa17.08■□□□□ 0.32
DDX39A-215ENST00000590696 RBMXL1Q96E39 390 aaKnown RBP17.08■□□□□ 0.32
DDX39A-215ENST00000590696 TRBV5-5A0A0J9YX44 114 aa17.07■□□□□ 0.32
DDX39A-215ENST00000590696 MAGEA13PA6NCF6 341 aa17.07■□□□□ 0.32
DDX39A-215ENST00000590696 C12orf77C9JDV5 145 aa17.07■□□□□ 0.32
DDX39A-215ENST00000590696 VSIG8P0DPA2 414 aa17.07■□□□□ 0.32
DDX39A-215ENST00000590696 GP2P55259 537 aaKnown RBP17.07■□□□□ 0.32
DDX39A-215ENST00000590696 GPR176Q14439 515 aa17.07■□□□□ 0.32
DDX39A-215ENST00000590696 Q3ZCU0 254 aa17.07■□□□□ 0.32
DDX39A-215ENST00000590696 SYT6Q5T7P8 510 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-215ENST00000590696 SLC25A48Q6ZT89 311 aaKnown RBP17.07■□□□□ 0.32
DDX39A-215ENST00000590696 ZNF439Q8NDP4 499 aa17.07■□□□□ 0.32
DDX39A-215ENST00000590696 OR8U1Q8NH10 309 aa17.07■□□□□ 0.32
DDX39A-215ENST00000590696 WWC2-AS2Q96NR7 200 aa17.07■□□□□ 0.32
DDX39A-215ENST00000590696 TRAPPC2LQ9UL33 140 aa17.07■□□□□ 0.32
DDX39A-215ENST00000590696 MCRIP1C9JLW8 97 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 SPINT2O43291 252 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 RRP9O43818 475 aaKnown RBP17.06■□□□□ 0.32
DDX39A-215ENST00000590696 GPX5O75715 221 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 ELANEP08246 267 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 CDX1P47902 265 aaPredicted RBP17.06■□□□□ 0.32
DDX39A-215ENST00000590696 ZNF134P52741 427 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 F2RL1P55085 397 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 FOXE3Q13461 319 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 KIR2DS1Q14954 304 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 OR10V1Q8NGI7 309 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 OR4K15Q8NH41 348 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 HSPB9Q9BQS6 159 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 SPACA1Q9HBV2 294 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 ETAA1Q9NY74 926 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 RCC2Q9P258 522 aaKnown RBP17.06■□□□□ 0.32
DDX39A-215ENST00000590696 GNG12Q9UBI6 72 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 CKLFQ9UBR5 152 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 CLEC2DQ9UHP7 191 aa17.06■□□□□ 0.32
DDX39A-215ENST00000590696 DIMT1Q9UNQ2 313 aaKnown RBP17.06■□□□□ 0.32
DDX39A-215ENST00000590696 EXOSC1Q9Y3B2 195 aaKnown RBP17.06■□□□□ 0.32
DDX39A-215ENST00000590696 TRAV8-7A0A075B6U6 113 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 IRGMA1A4Y4 181 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 TXNL1O43396 289 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 RAMP3O60896 148 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 MYL12AP19105 171 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 LUMP51884 338 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-215ENST00000590696 Q499Y3 187 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 CT45A1Q5HYN5 189 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 DMKNQ6E0U4 476 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-215ENST00000590696 GLIPR1L1Q6UWM5 242 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 PRR18Q8N4B5 295 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 FAM71E2Q8N5Q1 922 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 RNF152Q8N8N0 203 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 OR8H1Q8NGG4 311 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 OR5M8Q8NGP6 311 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 CT45A3Q8NHU0 189 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 MUL1Q969V5 352 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 RAB9BQ9NP90 201 aa17.05■□□□□ 0.32
DDX39A-215ENST00000590696 SMPD3Q9NY59 655 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-215ENST00000590696 MRPS28Q9Y2Q9 187 aaKnown RBP17.05■□□□□ 0.32
DDX39A-215ENST00000590696 HBZP02008 142 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 SOX6P35712 828 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 VHLP40337 213 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 ZNF137PP52743 207 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 RPS11P62280 158 aaKnown RBP eCLIP17.04■□□□□ 0.32
DDX39A-215ENST00000590696 CFHR3Q02985 330 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 YIF1BQ5BJH7 314 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 C6orf183Q5T699 404 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 RAB12Q6IQ22 244 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 JAGN1Q8N5M9 183 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 ZFP41Q8N8Y5 198 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 OR1L1Q8NH94 360 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 RDH12Q96NR8 316 aa17.04■□□□□ 0.32
DDX39A-215ENST00000590696 A0A1W2PPK0 400 aa17.03■□□□□ 0.32
DDX39A-215ENST00000590696 IGHG4P01861 327 aa17.03■□□□□ 0.32
DDX39A-215ENST00000590696 VDAC1P21796 283 aa17.03■□□□□ 0.32
DDX39A-215ENST00000590696 TMEM30BQ3MIR4 351 aa17.03■□□□□ 0.32
DDX39A-215ENST00000590696 C9orf66Q5T8R8 295 aa17.03■□□□□ 0.32
DDX39A-215ENST00000590696 MRPS24Q96EL2 167 aaKnown RBP17.03■□□□□ 0.32
DDX39A-215ENST00000590696 TMEM80Q96HE8 168 aa17.03■□□□□ 0.32
DDX39A-215ENST00000590696 PGLYRP3Q96LB9 341 aa17.03■□□□□ 0.32
DDX39A-215ENST00000590696 CHCHD3Q9NX63 227 aaKnown RBP17.03■□□□□ 0.32
DDX39A-215ENST00000590696 PEX16Q9Y5Y5 336 aa17.03■□□□□ 0.32
DDX39A-215ENST00000590696 RYR3Q15413 4870 aa17.03■□□□□ 0.32
DDX39A-215ENST00000590696 BAG2O95816 211 aa17.02■□□□□ 0.32
DDX39A-215ENST00000590696 RCC1P18754 421 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms