RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 GNPNAT1Q96EK6 184 aaPredicted RBP13.08□□□□□ -0.31
CIRBP-228ENST00000590347 LOXL4Q96JB6 756 aa13.08□□□□□ -0.31
CIRBP-228ENST00000590347 LYRM4Q9HD34 91 aa13.08□□□□□ -0.31
CIRBP-228ENST00000590347 ZNHIT1O43257 154 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 UBE2G2P60604 165 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 PIGYQ3MUY2 71 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 TMEM92Q6UXU6 159 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 ARHGEF39Q8N4T4 335 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 OR6C1Q96RD1 312 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 TP53TG3Q9ULZ0 132 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 ZNF732B4DXR9 585 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 ADH1BP00325 375 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 C1QTNF9P0C862 333 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 CTSEP14091 401 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 COL8A2P25067 703 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 BLKP51451 505 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 KLF3P57682 345 aaPredicted RBP13.08□□□□□ -0.32
CIRBP-228ENST00000590347 RAC1P63000 192 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 PRR31Q5SQ13 230 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 DERL1Q9BUN8 251 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 CTDSP1Q9GZU7 261 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 ZDHHC11Q9H8X9 412 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 PRTFDC1Q9NRG1 225 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 LAMTOR2Q9Y2Q5 125 aa13.08□□□□□ -0.32
CIRBP-228ENST00000590347 IFNA5P01569 189 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 ARL16Q0P5N6 197 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 BAGE3Q86Y29 109 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 BAGE2Q86Y30 109 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 MRPL30Q8TCC3 161 aaKnown RBP13.07□□□□□ -0.32
CIRBP-228ENST00000590347 C20orf144Q9BQM9 153 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 FBXL7Q9UJT9 491 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 C3orf85A0A1B0GTC6 90 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 PMCHP20382 165 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 LINC00310P59036 64 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 HERV-K104P61576 105 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 C1orf61Q13536 156 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 KIAA1644Q3SXP7 199 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 FLVCR1-AS1Q8TAF5 88 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 LIPHQ8WWY8 451 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 PSMF1Q92530 271 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 ZNF501Q96CX3 271 aaPredicted RBP13.07□□□□□ -0.32
CIRBP-228ENST00000590347 PYGO2Q9BRQ0 406 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 HRASLS2Q9NWW9 162 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 TCFL5Q9UL49 500 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 FAM186AA6NE01 2351 aa13.07□□□□□ -0.32
CIRBP-228ENST00000590347 GP1BBP13224 206 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 OR1D4P47884 311 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 GABREP78334 506 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 UBE2V1Q13404 147 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 SP5Q6BEB4 398 aaPredicted RBP13.06□□□□□ -0.32
CIRBP-228ENST00000590347 SCGB1C1Q8TD33 95 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 ST6GALNAC6Q969X2 333 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 ELSPBP1Q96BH3 223 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 GABRG3Q99928 467 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 C3orf80F5H4A9 247 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 IGKV1D-33P01593 117 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 IGKV1-33P01594 117 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 TLE3Q04726 772 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 TEX43Q6ZNM6 134 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 Q6ZS52 159 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 NUDT10Q8NFP7 164 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 MRGPRX1Q96LB2 322 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
CIRBP-228ENST00000590347 NECAP2Q9NVZ3 263 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 DMDP11532 3685 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 SDK2Q58EX2 2172 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 A0A0G2JRQ6 117 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 ODAMA1E959 279 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 PRSS38A1L453 326 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 NPIPA2E9PIF3 369 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 TGFBR3Q03167 851 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 ZNF468Q5VIY5 522 aaPredicted RBP13.06□□□□□ -0.32
CIRBP-228ENST00000590347 CRIP3Q6Q6R5 217 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 TBC1D26Q86UD7 250 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 H1FOOQ8IZA3 346 aaPredicted RBP13.06□□□□□ -0.32
CIRBP-228ENST00000590347 SNIP1Q8TAD8 396 aaKnown RBP13.06□□□□□ -0.32
CIRBP-228ENST00000590347 KIR3DX1Q9H7L2 352 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 SLC39A9Q9NUM3 307 aa13.06□□□□□ -0.32
CIRBP-228ENST00000590347 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 YPEL1O60688 119 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 MEF2BQ02080 365 aaPredicted RBP13.05□□□□□ -0.32
CIRBP-228ENST00000590347 FNDC7Q5VTL7 733 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 LCN12Q6JVE5 192 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 CYP2G1PQ6ZSU1 146 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 ZDHHC23Q8IYP9 409 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 OR10V1Q8NGI7 309 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 YPEL2Q96QA6 119 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 TBL1XR1Q9BZK7 514 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 OBP2AQ9NY56 170 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 LHFPL6Q9Y693 200 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 CELA2BP08218 269 aaPredicted RBP13.05□□□□□ -0.32
CIRBP-228ENST00000590347 PSG1P11464 419 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 FBXW4P57775 412 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 ARL6IP1Q15041 203 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 FBLN7Q53RD9 439 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 OR8G2PQ6IF36 304 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 ZNF114Q8NC26 417 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 FAM131CQ96AQ9 280 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 STARD4Q96DR4 205 aa13.05□□□□□ -0.32
CIRBP-228ENST00000590347 MMABQ96EY8 250 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms