RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318		A0A1B0GX30	115 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	BTBD17	A6NE02	478 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	IQCF6	A8MYZ5	107 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	TGOLN2	O43493	480 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	CA6	P23280	308 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	AKIRIN2	Q53H80	203 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	KCTD9	Q7L273	389 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	FAM24B	Q8N5W8	94 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	OR5R1	Q8NH85	324 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	SECTM1	Q8WVN6	248 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	MAFIP	Q8WZ33	124 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	RRNAD1	Q96FB5	475 aa	Known RBP	13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	SCGB3A2	Q96PL1	93 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	PBDC1	Q9BVG4	233 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	PECR	Q9BY49	303 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	KCNIP3	Q9Y2W7	256 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	CBY1	Q9Y3M2	126 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	CAD	P27708	2225 aa		13.1	□□□□□ -0.31
DDX39A-209	ENST00000589318	C13orf42	A0A1B0GVH6	325 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318		A0A1B0GW64	132 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	MED19	A0JLT2	244 aa	Predicted RBP	13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	TSPAN15	O95858	294 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	NPBWR2	P48146	333 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	OR2B8P	P59922	312 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	HNF4G	Q14541	408 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	IGFBP7	Q16270	282 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	C3orf36	Q3SXR2	165 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	YPEL4	Q96NS1	127 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	UNKL	Q9H9P5	680 aa	Known RBP	13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318		C9JQL5	133 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	RD3L	P0DJH9	198 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	VAMP1	P23763	118 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	GABRR1	P24046	479 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	SNCA	P37840	140 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	ZNF83	P51522	516 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	TAF9	Q16594	264 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	PIGY	Q3MUY2	71 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	TMEM268	Q5VZI3	342 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318		Q6ZRG5	221 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	SAXO1	Q8IYX7	474 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	FBXL14	Q8N1E6	418 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	OSR2	Q8N2R0	312 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	LFNG	Q8NES3	379 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	OR4S1	Q8NGB4	309 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	GALNT14	Q96FL9	552 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	MEGF10	Q96KG7	1140 aa		13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	NOL4L	Q96MY1	436 aa	Predicted RBP	13.09	□□□□□ -0.31
DDX39A-209	ENST00000589318	OR5B21	A6NL26	309 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	TCAP	O15273	167 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	NDUFB7	P17568	137 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	GNG3	P63215	75 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	PPA1	Q15181	289 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	TMEM128	Q5BJH2	165 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	ETV3L	Q6ZN32	361 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	C6orf201	Q7Z4U5	140 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	WDR86	Q86TI4	376 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	BEND2	Q8NDZ0	799 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	HIST1H2AA	Q96QV6	131 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	VKORC1	Q9BQB6	163 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	MTCH1	Q9NZJ7	389 aa		13.08	□□□□□ -0.32
DDX39A-209	ENST00000589318	CXorf65	A6NEN9	183 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318		H0YIZ8	118 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	GEMIN2	O14893	280 aa	Known RBP	13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	PPP1R2P9	O14990	202 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	SYNGR1	O43759	233 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	OR2C1	O95371	312 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	BCL3	P20749	454 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	TUBG1	P23258	451 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	RBM11	P57052	281 aa	Known RBP	13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	GUK1	Q16774	197 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	UBAC2	Q8NBM4	344 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	CASTOR1	Q8WTX7	329 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	ISOC2	Q96AB3	205 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	MUCL1	Q96DR8	90 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	C2orf50	Q96LR7	162 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	HS3ST6	Q96QI5	342 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	SLC35B3	Q9H1N7	401 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	OR51I2	Q9H344	312 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	SPACA1	Q9HBV2	294 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	KCNJ16	Q9NPI9	418 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	OR2S2	Q9NQN1	319 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	TUBG2	Q9NRH3	451 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318		A0A087WWC5	75 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	IFITM10	A6NMD0	228 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	SERPINE3	A8MV23	424 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	UMAD1	C9J7I0	102 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318		M0R1B8	84 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	YIF1A	O95070	293 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	IFNA6	P05013	189 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	SELE	P16581	610 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	CHAT	P28329	748 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	AKR1C3	P42330	323 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	MSMP	Q1L6U9	139 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	ACTBL2	Q562R1	376 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	BATF2	Q8N1L9	274 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	ST6GALNAC3	Q8NDV1	305 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	ELOVL5	Q9NYP7	299 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	DOK5	Q9P104	306 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms