RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 MRPL28Q13084 256 aaKnown RBP14.33□□□□□ -0.12
CCDC43-204ENST00000588687 ZNF260Q3ZCT1 412 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 CASC10Q5T4H9 136 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 LINC00596Q86U02 117 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 SATL1Q86VE3 508 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 OR11H1Q8NG94 326 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 OR52N1Q8NH53 320 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 MRPL48Q96GC5 212 aaKnown RBP14.33□□□□□ -0.12
CCDC43-204ENST00000588687 GNB4Q9HAV0 340 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 A0A1W2PP11 408 aa14.32□□□□□ -0.12
CCDC43-204ENST00000588687 C12orf77C9JDV5 145 aa14.32□□□□□ -0.12
CCDC43-204ENST00000588687 MT-ND4P03905 459 aa14.32□□□□□ -0.12
CCDC43-204ENST00000588687 VDAC1P21796 283 aa14.32□□□□□ -0.12
CCDC43-204ENST00000588687 SOX6P35712 828 aa14.32□□□□□ -0.12
CCDC43-204ENST00000588687 RUNX1Q01196 453 aa14.32□□□□□ -0.12
CCDC43-204ENST00000588687 MPV17LQ2QL34 196 aa14.32□□□□□ -0.12
CCDC43-204ENST00000588687 ZIK1Q3SY52 487 aaPredicted RBP14.32□□□□□ -0.12
CCDC43-204ENST00000588687 MUC7Q8TAX7 377 aa14.32□□□□□ -0.12
CCDC43-204ENST00000588687 RASL11BQ9BPW5 248 aa14.32□□□□□ -0.12
CCDC43-204ENST00000588687 KLK15Q9H2R5 256 aa14.32□□□□□ -0.12
CCDC43-204ENST00000588687 RCC2Q9P258 522 aaKnown RBP14.32□□□□□ -0.12
CCDC43-204ENST00000588687 TXNL1O43396 289 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 LIMS3P0CW19 117 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 LIMS4P0CW20 117 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 IL3RAP26951 378 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 ALDH3A2P51648 485 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 GNB1P62873 340 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 LSAMPQ13449 338 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 CT45A1Q5HYN5 189 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 SBSPONQ8IVN8 264 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 GAPTQ8N292 157 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 OR52I1Q8NGK6 324 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 CT45A3Q8NHU0 189 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 CCDC107Q8WV48 283 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 TMEM106AQ96A25 262 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 CYYR1Q96J86 154 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 AMBNQ9NP70 447 aa14.31□□□□□ -0.12
CCDC43-204ENST00000588687 MRPS18AQ9NVS2 196 aaKnown RBP14.31□□□□□ -0.12
CCDC43-204ENST00000588687 MAGEA13PA6NCF6 341 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 SNTNA6NMZ2 147 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 H3BNX3 289 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 MAGEB3O15480 346 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 FADS2O95864 444 aaKnown RBP14.3□□□□□ -0.12
CCDC43-204ENST00000588687 IGLV1-40P01703 118 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 INSL3P51460 131 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 RAB40BQ12829 278 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 DDI2Q5TDH0 399 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 ZNF491Q8N8L2 437 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 RHOXF1Q8NHV9 184 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 GPR148Q8TDV2 347 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 PYDC1Q8WXC3 89 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 ORAI1Q96D31 301 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 UBE2E2Q96LR5 201 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 METTL9Q9H1A3 318 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 TMEM138Q9NPI0 162 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 ZNF107Q9UII5 783 aaPredicted RBP14.3□□□□□ -0.12
CCDC43-204ENST00000588687 SMAD5-AS1Q9Y6J3 95 aa14.3□□□□□ -0.12
CCDC43-204ENST00000588687 AIPO00170 330 aa14.29□□□□□ -0.12
CCDC43-204ENST00000588687 OR8U8P0C7N1 319 aa14.29□□□□□ -0.12
CCDC43-204ENST00000588687 SLC2A2P11168 524 aaPredicted RBP14.29□□□□□ -0.12
CCDC43-204ENST00000588687 SERPINA2P20848 420 aa14.29□□□□□ -0.12
CCDC43-204ENST00000588687 ZNF93P35789 620 aaPredicted RBP14.29□□□□□ -0.12
CCDC43-204ENST00000588687 GBX2P52951 348 aaPredicted RBP14.29□□□□□ -0.12
CCDC43-204ENST00000588687 APH1BQ8WW43 257 aa14.29□□□□□ -0.12
CCDC43-204ENST00000588687 RCHY1Q96PM5 261 aa14.29□□□□□ -0.12
CCDC43-204ENST00000588687 MYCBPQ99417 103 aaPredicted RBP14.29□□□□□ -0.12
CCDC43-204ENST00000588687 FAM90A10PA6NDY2 464 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 G3V318 75 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 ATP6V0E1O15342 81 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 LANCL1O43813 399 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 OR5H8P0DN80 308 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 IGFBP3P17936 291 aaPredicted RBP14.28□□□□□ -0.12
CCDC43-204ENST00000588687 MYF6P23409 242 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 ZNF616Q08AN1 781 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 TMEM30BQ3MIR4 351 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 C19orf54Q5BKX5 351 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 ATAD3CQ5T2N8 411 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 ODF3L1Q8IXM7 274 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 OR10V1Q8NGI7 309 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 OR1L1Q8NH94 360 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 RITA1Q96K30 269 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 CHCHD6Q9BRQ6 235 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 ISYNA1Q9NPH2 558 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 ING4Q9UNL4 249 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 ORC6Q9Y5N6 252 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 GMPPBQ9Y5P6 360 aa14.28□□□□□ -0.12
CCDC43-204ENST00000588687 IGHV7-81A0A0B4J1V7 117 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 HLA-DRB1P01911 266 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 HBZP02008 142 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 CSTBP04080 98 aaKnown RBP14.27□□□□□ -0.13
CCDC43-204ENST00000588687 CD2P06729 351 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 CNTFRP26992 372 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 BDKRB2P30411 391 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 NDPQ00604 133 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 MMDQ15546 238 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 SLC22A6Q4U2R8 563 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 CCDC58Q4VC31 144 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 SYT6Q5T7P8 510 aaPredicted RBP14.27□□□□□ -0.13
CCDC43-204ENST00000588687 CBR4Q8N4T8 237 aa14.27□□□□□ -0.13
CCDC43-204ENST00000588687 OR1N2Q8NGR9 330 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms