RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 CHST6Q9GZX3 395 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 NUBP2Q9Y5Y2 271 aa16.61■□□□□ 0.25
ATG4D-208ENST00000588667 MCRIP1C9JLW8 97 aa16.6■□□□□ 0.25
ATG4D-208ENST00000588667 DEGS1O15121 323 aa16.6■□□□□ 0.25
ATG4D-208ENST00000588667 HOXB4P17483 251 aaPredicted RBP16.6■□□□□ 0.25
ATG4D-208ENST00000588667 DTYMKP23919 212 aa16.6■□□□□ 0.25
ATG4D-208ENST00000588667 ACTBL2Q562R1 376 aa16.6■□□□□ 0.25
ATG4D-208ENST00000588667 RNASE10Q5GAN6 216 aaKnown RBP16.6■□□□□ 0.25
ATG4D-208ENST00000588667 RSBN1Q5VWQ0 802 aaPredicted RBP16.6■□□□□ 0.25
ATG4D-208ENST00000588667 FAAP20Q6NZ36 180 aa16.6■□□□□ 0.25
ATG4D-208ENST00000588667 BRICD5Q6PL45 260 aa16.6■□□□□ 0.25
ATG4D-208ENST00000588667 ZNF782Q6ZMW2 699 aaPredicted RBP16.6■□□□□ 0.25
ATG4D-208ENST00000588667 OR4S1Q8NGB4 309 aa16.6■□□□□ 0.25
ATG4D-208ENST00000588667 SNX22Q96L94 193 aa16.6■□□□□ 0.25
ATG4D-208ENST00000588667 ST6GALNAC5Q9BVH7 336 aa16.6■□□□□ 0.25
ATG4D-208ENST00000588667 C12orf4Q9NQ89 552 aa16.6■□□□□ 0.25
ATG4D-208ENST00000588667 UBE2QL1A1L167 161 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 OR2H2O95918 312 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 TCRBP04435 133 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 ZNF44P15621 663 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 CCR6P51684 374 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 RIPPLY3P57055 190 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 RBM39Q14498 530 aaKnown RBP16.59■□□□□ 0.25
ATG4D-208ENST00000588667 OR52W1Q6IF63 320 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 OR4K15Q8NH41 348 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 MARVELD1Q9BSK0 173 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 TMEM82A0PJX8 343 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 TAS2R46P59540 309 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 C17orf107Q6ZR85 190 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 BEST4Q8NFU0 473 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 OR4D10Q8NGI6 311 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 OR5D13Q8NGL4 314 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 NANPQ8TBE9 248 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 NEK7Q8TDX7 302 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 SNAPC3Q92966 411 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 UPRTQ96BW1 309 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 CYYR1Q96J86 154 aa16.59■□□□□ 0.25
ATG4D-208ENST00000588667 DISC1C4P0D8 188 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 M0QYG6 137 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 SIRPB1O00241 398 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 PSPNO60542 156 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 FSHBP01225 129 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 AMY2AP04746 511 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 LMO1P25800 156 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 METTL11BQ5VVY1 283 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 Q6P435 159 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 SUMF2Q8NBJ7 301 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 OR56B4Q8NH76 319 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 PPP1R35Q8TAP8 253 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 HDHD3Q9BSH5 251 aaPredicted RBP16.58■□□□□ 0.24
ATG4D-208ENST00000588667 DPCDQ9BVM2 203 aaPredicted RBP16.58■□□□□ 0.24
ATG4D-208ENST00000588667 TINAGL1Q9GZM7 467 aaPredicted RBP16.58■□□□□ 0.24
ATG4D-208ENST00000588667 NUDT15Q9NV35 164 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 KPTNQ9Y664 436 aa16.58■□□□□ 0.24
ATG4D-208ENST00000588667 TRAV24A0A0B4J272 114 aa16.57■□□□□ 0.24
ATG4D-208ENST00000588667 INMT-MINDY4F8WBC2 141 aa16.57■□□□□ 0.24
ATG4D-208ENST00000588667 FCGR3AP08637 254 aa16.57■□□□□ 0.24
ATG4D-208ENST00000588667 MMP9P14780 707 aa16.57■□□□□ 0.24
ATG4D-208ENST00000588667 HRH1P35367 487 aa16.57■□□□□ 0.24
ATG4D-208ENST00000588667 RPL31P62899 125 aaKnown RBP16.57■□□□□ 0.24
ATG4D-208ENST00000588667 BPIFB2Q8N4F0 458 aa16.57■□□□□ 0.24
ATG4D-208ENST00000588667 KIR3DL3Q8N743 410 aa16.57■□□□□ 0.24
ATG4D-208ENST00000588667 OR51S1Q8NGJ8 323 aa16.57■□□□□ 0.24
ATG4D-208ENST00000588667 RIMS4Q9H426 269 aaPredicted RBP16.57■□□□□ 0.24
ATG4D-208ENST00000588667 C19orf12Q9NSK7 152 aa16.57■□□□□ 0.24
ATG4D-208ENST00000588667 ONECUT1Q9UBC0 465 aa16.57■□□□□ 0.24
ATG4D-208ENST00000588667 ZNF230Q9UIE0 474 aaPredicted RBP16.57■□□□□ 0.24
ATG4D-208ENST00000588667 SCP2D1Q9UJQ7 156 aa16.57■□□□□ 0.24
ATG4D-208ENST00000588667 FUOMA2VDF0 154 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 IFNA6P05013 189 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 OR3A1P47881 315 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 BCAP31P51572 246 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 ARF6P62330 175 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 RBMS2Q15434 407 aaKnown RBP16.56■□□□□ 0.24
ATG4D-208ENST00000588667 GRK1Q15835 563 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 FAM185AQ8N0U4 392 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 OR5H2Q8NGV7 314 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 DYRK2Q92630 601 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 PRRT1Q99946 306 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 SIRPDQ9H106 197 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 CHMP1AQ9HD42 196 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-208ENST00000588667 KIAA2026Q5HYC2 2103 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 SLC33A1O00400 549 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-208ENST00000588667 HSPB6O14558 160 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 MGST3O14880 152 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 TOX4O94842 621 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 NDUFB6O95139 128 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 OR3A3P47888 321 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 RAG2P55895 527 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 SCGB2A2Q13296 93 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 PAN3Q58A45 887 aaKnown RBP16.56■□□□□ 0.24
ATG4D-208ENST00000588667 VAX1Q5SQQ9 334 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 PCGF1Q9BSM1 259 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 C20orf85Q9H1P6 137 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 SLC2A8Q9NY64 477 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 ETAA1Q9NY74 926 aa16.56■□□□□ 0.24
ATG4D-208ENST00000588667 TRAV6A0A075B6T7 132 aa16.55■□□□□ 0.24
ATG4D-208ENST00000588667 DHFRP00374 187 aa16.55■□□□□ 0.24
ATG4D-208ENST00000588667 PMP2P02689 132 aa16.55■□□□□ 0.24
ATG4D-208ENST00000588667 H2AFB2P0C5Z0 115 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms