RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PLEKHJ1Q9NW61 149 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 ING3Q9NXR8 418 aa11.2□□□□□ -0.62
PRKCSH-202ENST00000585540 COL6A5A8TX70 2615 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 A0A0A6YYD4 124 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 TMEM272A0A1B0GTI8 110 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 A0A1W2PRD5 423 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 A0A1W2PRF3 423 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 A0A1W2PRM7 423 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 C15orf65H3BRN8 121 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 LDLRAD4O15165 306 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 GPR137BO60478 399 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 GABARAPO95166 117 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 IGHV4-59P01825 116 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 BLVRBP30043 206 aaPredicted RBP11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 BRS3P32247 399 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 MNDAP41218 407 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 DLX1P56177 255 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 SRSF2Q01130 221 aaKnown RBP11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 PRB3Q04118 309 aaPredicted RBP11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 LY6G6FQ5SQ64 297 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 STEAP3Q658P3 488 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 DHRS7BQ6IAN0 325 aaPredicted RBP11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 C11orf88Q6PI97 169 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 BRICD5Q6PL45 260 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 LINC00311Q8N616 119 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 ARL11Q969Q4 196 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 AJUBAQ96IF1 538 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 LIN7BQ9HAP6 207 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 JPT1Q9UK76 154 aa11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 SOX21Q9Y651 276 aaPredicted RBP11.19□□□□□ -0.62
PRKCSH-202ENST00000585540 FAM181BA6NEQ2 426 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 H3BUX3 64 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 J3QR06 171 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 TXNL1O43396 289 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 RGS11O94810 467 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 OMGP23515 440 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 NFYBP25208 207 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 IL3RAP26951 378 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 SSTR5P35346 364 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 RAB7AP51149 207 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 EFNB2P52799 333 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 VBP1P61758 197 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 HTD2P86397 168 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 C2orf76Q3KRA6 126 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 AWAT1Q58HT5 328 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 NKAPLQ5M9Q1 402 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 GPR107Q5VW38 600 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 ANKRD13BQ86YJ7 626 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 OR8H3Q8N146 312 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 AKR1E2Q96JD6 320 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 DUX5Q96PT3 197 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 BEX1Q9HBH7 125 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 ZNF286AQ9HBT8 521 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 GFOD1Q9NXC2 390 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 ABRACLQ9P1F3 81 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 DAPK2Q9UIK4 370 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 TCF19Q9Y242 345 aa11.18□□□□□ -0.62
PRKCSH-202ENST00000585540 FOXI3A8MTJ6 420 aaPredicted RBP11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 SERPINE3A8MV23 424 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 BUB1B-PAK6H3BSN5 160 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 SDCBPO00560 298 aaPredicted RBP11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 MMP23AO75900 390 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 TSPAN9O75954 239 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 DIRAS3O95661 229 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 NAPSAO96009 420 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 RPL5P46777 297 aaKnown RBP11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 SERPINB10P48595 397 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 RAG2P55895 527 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 MRPS15P82914 257 aaKnown RBP11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 MADCAM1Q13477 382 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 SSX2Q16385 188 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 CTF1Q16619 201 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 ZNF880Q6PDB4 577 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 Q6ZTK2 550 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 LHFPL4Q7Z7J7 247 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 MRPL30Q8TCC3 161 aaKnown RBP11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 RPEQ96AT9 228 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 OCSTAMPQ9BR26 566 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 C16orf95Q9H693 158 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 SCOCQ9UIL1 159 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 ETV7Q9Y603 341 aa11.17□□□□□ -0.62
PRKCSH-202ENST00000585540 UBE2QL1A1L167 161 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 C12orf77C9JDV5 145 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 SNRPBP14678 240 aaKnown RBP11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 RPS19P39019 145 aaKnown RBP11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 GDNFP39905 211 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 HMGN3Q15651 99 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 TPTE2P1Q5T6R2 138 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 C6orf201Q7Z4U5 140 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 CLVS1Q8IUQ0 354 aaPredicted RBP11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 OR10X1Q8NGY0 326 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 OR4K15Q8NH41 348 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 LGALS14Q8TCE9 139 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 GALMQ96C23 342 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 SULT4A1Q9BR01 284 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 NPFFR1Q9GZQ6 430 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 GHITMQ9H3K2 345 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 TAF9BQ9HBM6 251 aa11.16□□□□□ -0.62
PRKCSH-202ENST00000585540 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms