RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-219	ENST00000584476	TSPAN5	P62079	268 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	TLE4	Q04727	773 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	CD300C	Q08708	224 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	BAMBI	Q13145	260 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	KIR2DS1	Q14954	304 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	HMGN3	Q15651	99 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	HFE	Q30201	348 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	KRBOX4	Q5JUW0	171 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	AVPI1	Q5T686	147 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	SP5	Q6BEB4	398 aa	Predicted RBP	4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	DHRS11	Q6UWP2	260 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	TMED4	Q7Z7H5	227 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	LHFPL1	Q86WI0	220 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	C1orf87	Q8N0U7	546 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	ADAD2	Q8NCV1	583 aa	Known RBP	4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	TMEM185A	Q8NFB2	350 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	OR52B4	Q8NGK2	314 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	OR13A1	Q8NGR1	328 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	OR6F1	Q8NGZ6	308 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	OR1L1	Q8NH94	360 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	MRGPRD	Q8TDS7	321 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	CAPSL	Q8WWF8	208 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	SEC22C	Q9BRL7	303 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	FXYD6	Q9H0Q3	95 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	GHITM	Q9H3K2	345 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	ZNF665	Q9H7R5	613 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	PLEKHF2	Q9H8W4	249 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	TAF9B	Q9HBM6	251 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	OR1A1	Q9P1Q5	309 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	TRAPPC2L	Q9UL33	140 aa		4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	CHD3	Q12873	2000 aa	Known RBP	4.85	□□□□□ -1.63
MSI2-219	ENST00000584476	TRBV6-7	A0A0A0MS04	114 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	ODAM	A1E959	279 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	NKX6-3	A6NJ46	265 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	CEACAM18	A8MTB9	384 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476		A8MV72	311 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	C12orf77	C9JDV5	145 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	C15orf65	H3BRN8	121 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476		H7C1Q1	480 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	MGST3	O14880	152 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	SIGLEC5	O15389	551 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	ADAM20	O43506	726 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	GOSR1	O95249	250 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	IGHV2-70	P01814	119 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	HBZ	P02008	142 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	IL5	P05113	134 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	DAO	P14920	347 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	PI3	P19957	117 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	FPR2	P25090	351 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	GLP1R	P43220	463 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	P2RX3	P56373	397 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	EDDM3B	P56851	147 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	FXYD4	P59646	89 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	IL13RA1	P78552	427 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	PAX5	Q02548	391 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	CBX3	Q13185	183 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	MOB1B	Q7L9L4	216 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	PEG10	Q86TG7	708 aa	Known RBP	4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	TMEM17	Q86X19	198 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	PRR18	Q8N4B5	295 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	ZNF561	Q8N587	486 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	ZDHHC22	Q8N966	263 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	OR52L2P	Q8NGH6	319 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	OR4A4P	Q8NGN8	299 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	RFESD	Q8TAC1	157 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	PPP1R35	Q8TAP8	253 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	CHAC2	Q8WUX2	184 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	NEU4	Q8WWR8	484 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	IL1F10	Q8WWZ1	152 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	IGFBPL1	Q8WX77	278 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	TMEM230	Q96A57	120 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	DACT3	Q96B18	629 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	NEURL2	Q9BR09	285 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	TMEM246	Q9BRR3	403 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	CABLES2	Q9BTV7	478 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	ALX4	Q9H161	411 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	OR51J1	Q9H342	316 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	C5orf66	Q9H5L9	145 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	MYOZ1	Q9NP98	299 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	DLL4	Q9NR61	685 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	CTSZ	Q9UBR2	303 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	FBXO9	Q9UK97	447 aa	Predicted RBP	4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	GPR132	Q9UNW8	380 aa		4.84	□□□□□ -1.63
MSI2-219	ENST00000584476	NBEA	Q8NFP9	2946 aa		4.83	□□□□□ -1.64
MSI2-219	ENST00000584476	CACNA1D	Q01668	2161 aa		4.83	□□□□□ -1.64
MSI2-219	ENST00000584476	IGKV1D-13	A0A0B4J2D9	117 aa		4.83	□□□□□ -1.64
MSI2-219	ENST00000584476	HMX3	A6NHT5	357 aa		4.83	□□□□□ -1.64
MSI2-219	ENST00000584476	NPIPB11	E5RHQ5	1161 aa		4.83	□□□□□ -1.64
MSI2-219	ENST00000584476		J3QKU1	62 aa		4.83	□□□□□ -1.64
MSI2-219	ENST00000584476	OVOL3	O00110	214 aa		4.83	□□□□□ -1.64
MSI2-219	ENST00000584476	PRAF2	O60831	178 aa		4.83	□□□□□ -1.64
MSI2-219	ENST00000584476	PFDN1	O60925	122 aa		4.83	□□□□□ -1.64
MSI2-219	ENST00000584476	TUSC2	O75896	110 aa		4.83	□□□□□ -1.64
MSI2-219	ENST00000584476	PPY	P01298	95 aa		4.83	□□□□□ -1.64
MSI2-219	ENST00000584476	CTXN2	P0C2S0	81 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms