RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 ADI1Q9BV57 179 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 CHST5Q9GZS9 411 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 ABCG5Q9H222 651 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 ZMAT4Q9H898 229 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 PLEKHA1Q9HB21 404 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 SLC25A19Q9HC21 320 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 EXOSC4Q9NPD3 245 aaKnown RBP4.16□□□□□ -1.74
VAPA-207ENST00000583879 NDE1Q9NXR1 346 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 ING3Q9NXR8 418 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 OR6C3Q9NZP0 311 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 H2AFY2Q9P0M6 372 aaPredicted RBP4.16□□□□□ -1.74
VAPA-207ENST00000583879 NKX1-2Q9UD57 310 aaPredicted RBP4.16□□□□□ -1.74
VAPA-207ENST00000583879 MRM2Q9UI43 246 aaKnown RBP4.16□□□□□ -1.74
VAPA-207ENST00000583879 GSTK1Q9Y2Q3 226 aa4.16□□□□□ -1.74
VAPA-207ENST00000583879 AMMECR1Q9Y4X0 333 aaPredicted RBP4.16□□□□□ -1.74
VAPA-207ENST00000583879 IGKV1-9A0A0C4DH69 117 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 IGKV1-12A0A0C4DH73 117 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 MFSD2BA6NFX1 497 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 NCBP2LA6PVI3 153 aaKnown RBP4.15□□□□□ -1.75
VAPA-207ENST00000583879 NPIPB11E5RHQ5 1161 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 ZNF670-ZNF695F2Z2N8 137 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 H3BSH0 61 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 GNGT2O14610 69 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 DEGS1O15121 323 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 MPZL2O60487 215 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 SNX3O60493 162 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 ATP5HO75947 161 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 RPP14O95059 124 aaKnown RBP4.15□□□□□ -1.75
VAPA-207ENST00000583879 LY86O95711 162 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 IGKV1D-12P01611 117 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 IGHV3-7P01780 117 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 IGHG4P01861 327 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 FRMD6-AS1P0C7T7 363 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 ZNF44P15621 663 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 C21orf33P30042 268 aaPredicted RBP4.15□□□□□ -1.75
VAPA-207ENST00000583879 GPR12P47775 334 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 POU3F4P49335 361 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 MECP2P51608 486 aaKnown RBP4.15□□□□□ -1.75
VAPA-207ENST00000583879 CRISP1P54107 249 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 SNU13P55769 128 aaKnown RBP4.15□□□□□ -1.75
VAPA-207ENST00000583879 EFNB1P98172 346 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 LSAMPQ13449 338 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 MADCAM1Q13477 382 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 FHL3Q13643 280 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 FAM27D1Q5T7N8 215 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 NXNL2Q5VZ03 156 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 ZFAND6Q6FIF0 208 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 Q6P435 159 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 SLC16A12Q6ZSM3 486 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 BCDIN3DQ7Z5W3 292 aaKnown RBP4.15□□□□□ -1.75
VAPA-207ENST00000583879 ZNF429Q86V71 674 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 TPRA1Q86W33 373 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 CATSPERDQ86XM0 798 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 TGIF2LXQ8IUE1 241 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 SLC35F2Q8IXU6 374 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 HS3ST5Q8IZT8 346 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 RDH10Q8IZV5 341 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 Q8N1Y9 231 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 YIPF7Q8N8F6 280 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 Q8N9W7 124 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 CHST4Q8NCG5 386 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 SETD9Q8NE22 299 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 SLC24A4Q8NFF2 622 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 OR1N2Q8NGR9 330 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 C4orf3Q8WVX3 66 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 PP6455Q8WZ26 134 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 LEAP2Q969E1 77 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 NEU1Q99519 415 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 COMMD4Q9H0A8 199 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 LINC00574Q9H8X3 128 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 RHOFQ9HBH0 211 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 ADGRL4Q9HBW9 690 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 LIN7CQ9NUP9 197 aaKnown RBP4.15□□□□□ -1.75
VAPA-207ENST00000583879 ARL8BQ9NVJ2 186 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 CLN6Q9NWW5 311 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 SMPD3Q9NY59 655 aaPredicted RBP4.15□□□□□ -1.75
VAPA-207ENST00000583879 IDI2-AS1Q9NZ38 188 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 PSG11Q9UQ72 335 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 X6R8D5 127 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 SACSQ9NZJ4 4579 aa4.15□□□□□ -1.75
VAPA-207ENST00000583879 IGHV1-3A0A0C4DH29 117 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 METTL15A6NJ78 407 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 I3L521 148 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 SLC33A1O00400 549 aaPredicted RBP4.14□□□□□ -1.75
VAPA-207ENST00000583879 PRKYO43930 277 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 CIB2O75838 187 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 SULT1C4O75897 302 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 KDM4BO94953 1096 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 GAPDHP04406 335 aaKnown RBP4.14□□□□□ -1.75
VAPA-207ENST00000583879 KRT8P05787 483 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 GLAP06280 429 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 OR8U8P0C7N1 319 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 OR2T7P0C7T2 308 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 ATF1P18846 271 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 PSMB8P28062 276 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 HTR1FP30939 366 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 CAPGP40121 348 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 CFHR3Q02985 330 aa4.14□□□□□ -1.75
VAPA-207ENST00000583879 ZNF816Q0VGE8 651 aaPredicted RBP4.14□□□□□ -1.75
VAPA-207ENST00000583879 KIAA0141Q14154 515 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms