RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 NIPAL1Q6NVV3 410 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 TCF23Q7RTU1 214 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 LRP11Q86VZ4 500 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 OR8K1Q8NGG5 319 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 OR52E4Q8NGH9 312 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 TSSK6Q9BXA6 273 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 CHST5Q9GZS9 411 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 UBQLN4Q9NRR5 601 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 SLC23A2Q9UGH3 650 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 VPREB3Q9UKI3 123 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 SCML1Q9UN30 329 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 CARHSP1Q9Y2V2 147 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 PHLDA3Q9Y5J5 127 aa1.77□□□□□ -2.13
SMCHD1-209ENST00000583441 ARAP3Q8WWN8 1544 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 DYSFO75923 2080 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 PIK3R4Q99570 1358 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 IGLV10-54A0A075B6I4 117 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 IGKV1D-37A0A075B6S9 117 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 E7EQL1 145 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 F5H5T6 163 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 CALUO43852 315 aaPredicted RBP1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 YEATS4O95619 227 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 OR12D1P0DN82 309 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 F8A1P23610 371 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 CRABP1P29762 137 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 AGTR1P30556 359 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 GABARAPL2P60520 117 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 MAPK14Q16539 360 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 SPIN4Q56A73 249 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 TIMM23BQ5SRD1 257 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 FAM45BPQ6NSW5 357 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 VN1R4Q7Z5H5 301 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 LFNGQ8NES3 379 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 OR7G1Q8NGA0 311 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 OR5D18Q8NGL1 313 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 MUC7Q8TAX7 377 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 OR8B2Q96RD0 313 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 EBNA1BP2Q99848 306 aaKnown RBP1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 ZNF286AQ9HBT8 521 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 FIS1Q9Y3D6 152 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 LINC00588Q9Y4M8 146 aa1.76□□□□□ -2.13
SMCHD1-209ENST00000583441 B4DEV8 164 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 TP53I11O14683 189 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 LECT2O14960 151 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 OCMP0CE72 109 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 GADD45AP24522 165 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 PSMA1P25786 263 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 CRATP43155 626 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 TNFRSF9Q07011 255 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 OR8G1Q15617 311 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 ZNHIT3Q15649 155 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 PDPK2PQ6A1A2 396 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 EBLN2Q6P2I7 272 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 OR11G2Q8NGC1 345 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 OR5L1Q8NGL2 311 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 OR51H1Q8NH63 302 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 STOML3Q8TAV4 291 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 TAMM41Q96BW9 452 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 POTEKPQ9BYX7 375 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 NRBP2Q9NSY0 501 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 WASHC3Q9Y3C0 194 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 AK9Q5TCS8 1911 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 SHANK1Q9Y566 2161 aa1.75□□□□□ -2.13
SMCHD1-209ENST00000583441 A0A1W2PNM2 257 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 G3V3Q6 166 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 J3QLI3 93 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 K7EQS6 105 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 M0QYV0 167 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 TOR1AO14656 332 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 SLC25A20O43772 301 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 CDK14O94921 469 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 ORM1P02763 201 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 CTSGP08311 255 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 PET100P0DJ07 73 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 PSMD7P51665 324 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 MAP3K7CLP57077 242 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 APOFQ13790 326 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 NOXRED1Q6NXP6 359 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 GPR119Q8TDV5 335 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 RBP7Q96R05 134 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 METTL9Q9H1A3 318 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 GTSF1LQ9H1H1 148 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 C11orf49Q9H6J7 331 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 METTL17Q9H7H0 456 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 SPANXB1Q9NS25 103 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 MRPL16Q9NX20 251 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 GLS2Q9UI32 602 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 LINC00527Q9UJ94 153 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 PTPRKQ15262 1439 aa1.74□□□□□ -2.13
SMCHD1-209ENST00000583441 NACADO15069 1562 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 MYO15BQ96JP2 1530 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 DAPL1A0PJW8 107 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 GOLGA6L10A6NI86 522 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 KLRC4-KLRK1H3BQV0 150 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 GOLGA8RI6L899 631 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 CFL1P23528 166 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 PSMB6P28072 239 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 GABRA3P34903 492 aa1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 FUSP35637 526 aaKnown RBP eCLIP1.73□□□□□ -2.13
SMCHD1-209ENST00000583441 DMTNQ08495 405 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms