RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 FAM90A9PA6NNJ1 464 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FAM90A12PA8MX19 464 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FAM90A5PA8MXJ8 464 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 SIRPB1O00241 398 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 RAMP3O60896 148 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 MAS1P04201 325 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FAM90A15PP0C7V4 464 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FAM90A13PP0C7W8 464 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FAM90A14PP0C7W9 464 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FAM90A24PP0C7X0 464 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FAM106CPP0CH98 169 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 CALCBP10092 127 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 PRKACAP17612 351 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 LMO1P25800 156 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 OR3A4PP47883 348 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 PRRX1P54821 245 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 SNU13P55769 128 aaKnown RBP10.72□□□□□ -0.69
SS18-222ENST00000582792 GPR176Q14439 515 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 NHLRC3Q5JS37 347 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 C1orf100Q5SVJ3 147 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FAM27D1Q5T7N8 215 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 THNSL2Q86YJ6 484 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 KLHL30-AS1Q8NEE0 82 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 CHPT1Q8WUD6 406 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 YIPF6Q96EC8 236 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 METTL9Q9H1A3 318 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 KIAA2026Q5HYC2 2103 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 NUDT19A8MXV4 375 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 C3orf84H3BNL1 204 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 PDCD5O14737 125 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 SH2D1BO14796 132 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 OR2H2O95918 312 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 UBBP0CG47 229 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 CD36P16671 472 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 MYL9P24844 172 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 CALRP27797 417 aaKnown RBP10.71□□□□□ -0.69
SS18-222ENST00000582792 GLIPR1P48060 266 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 AESQ08117 197 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 IL13RA2Q14627 380 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 JAGN1Q8N5M9 183 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 OR4D6Q8NGJ1 314 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 OR51T1Q8NGJ9 327 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 OR5D18Q8NGL1 313 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 RYR2Q92736 4967 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 MRPS24Q96EL2 167 aaKnown RBP10.71□□□□□ -0.69
SS18-222ENST00000582792 NOL4LQ96MY1 436 aaPredicted RBP10.71□□□□□ -0.69
SS18-222ENST00000582792 S100A13Q99584 98 aa10.71□□□□□ -0.69
SS18-222ENST00000582792 EXOSC4Q9NPD3 245 aaKnown RBP10.71□□□□□ -0.69
SS18-222ENST00000582792 TXNL4BQ9NX01 149 aaKnown RBP10.71□□□□□ -0.69
SS18-222ENST00000582792 LSM4Q9Y4Z0 139 aaKnown RBP10.71□□□□□ -0.69
SS18-222ENST00000582792 CSN2P05814 226 aa10.7□□□□□ -0.7
SS18-222ENST00000582792 SNRNP70P08621 437 aaKnown RBP10.7□□□□□ -0.7
SS18-222ENST00000582792 RBM39Q14498 530 aaKnown RBP10.7□□□□□ -0.7
SS18-222ENST00000582792 RSU1Q15404 277 aa10.7□□□□□ -0.7
SS18-222ENST00000582792 NKAPLQ5M9Q1 402 aa10.7□□□□□ -0.7
SS18-222ENST00000582792 LINC00596Q86U02 117 aa10.7□□□□□ -0.7
SS18-222ENST00000582792 TPRA1Q86W33 373 aa10.7□□□□□ -0.7
SS18-222ENST00000582792 COMMD1Q8N668 190 aa10.7□□□□□ -0.7
SS18-222ENST00000582792 C5orf56Q8N8D9 126 aa10.7□□□□□ -0.7
SS18-222ENST00000582792 OR6M1Q8NGM8 313 aa10.7□□□□□ -0.7
SS18-222ENST00000582792 OR13F1Q8NGS4 319 aa10.7□□□□□ -0.7
SS18-222ENST00000582792 OR51E2Q9H255 320 aa10.7□□□□□ -0.7
SS18-222ENST00000582792 ING4Q9UNL4 249 aa10.7□□□□□ -0.7
SS18-222ENST00000582792 MRPS28Q9Y2Q9 187 aaKnown RBP10.7□□□□□ -0.7
SS18-222ENST00000582792 DYNC2H1Q8NCM8 4307 aaKnown RBP10.7□□□□□ -0.7
SS18-222ENST00000582792 ODAMA1E959 279 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 ZNF729A6NN14 1252 aaPredicted RBP10.69□□□□□ -0.7
SS18-222ENST00000582792 SERPINE3A8MV23 424 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 SLC22A1O15245 554 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 FGF16O43320 207 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 GADD45AP24522 165 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 ALDH3B2P48448 385 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 SLC35B1P78383 322 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 C17orf58Q2M2W7 97 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 UTF1Q5T230 341 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 C22orf42Q6IC83 251 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 GLIPR1L1Q6UWM5 242 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 ZNF695Q8IW36 515 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 CHST4Q8NCG5 386 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 OR56B4Q8NH76 319 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 OR9G1Q8NH87 305 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 TOMM40LQ969M1 308 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 RPEQ96AT9 228 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 COQ2Q96H96 371 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 KCTD7Q96MP8 289 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 DUX3Q96PT4 197 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 FAM192AQ9GZU8 254 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 IFT22Q9H7X7 185 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 AMMECR1Q9Y4X0 333 aaPredicted RBP10.69□□□□□ -0.7
SS18-222ENST00000582792 V9GY05 133 aa10.69□□□□□ -0.7
SS18-222ENST00000582792 FAM90A10PA6NDY2 464 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 FAM90A7PA6NKC0 464 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 FAM90A23PA8MXZ1 464 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 CCL24O00175 119 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 SLC17A2O00624 439 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 TMEM127O75204 238 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 IGHG2P01859 326 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 CSTBP04080 98 aaKnown RBP10.68□□□□□ -0.7
SS18-222ENST00000582792 TFAP2AP05549 437 aa10.68□□□□□ -0.7
SS18-222ENST00000582792 NFYBP25208 207 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms