RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 FBP1P09467 338 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 GNB3P16520 340 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 SCAND1P57086 179 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 DYNC1I2Q13409 638 aaKnown RBP13.28□□□□□ -0.28
RNF43-206ENST00000582293 HMGN3Q15651 99 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 NDNFQ8TB73 568 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 PIFOQ8TCI5 191 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 ZDHHC16Q969W1 377 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 RAB3CQ96E17 227 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 ZMAT3Q9HA38 289 aaKnown RBP13.28□□□□□ -0.28
RNF43-206ENST00000582293 TAF9BQ9HBM6 251 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 RHBDL2Q9NX52 303 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 SPATA2Q9UM82 520 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 PSG11Q9UQ72 335 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 TBL2Q9Y4P3 447 aaKnown RBP13.28□□□□□ -0.28
RNF43-206ENST00000582293 ATRQ13535 2644 aa13.28□□□□□ -0.28
RNF43-206ENST00000582293 IGHV3-43A0A0B4J1X8 118 aa13.27□□□□□ -0.29
RNF43-206ENST00000582293 LY6LH3BQJ8 138 aa13.27□□□□□ -0.29
RNF43-206ENST00000582293 TMEM127O75204 238 aa13.27□□□□□ -0.29
RNF43-206ENST00000582293 IGHV3-43DP0DP04 118 aa13.27□□□□□ -0.29
RNF43-206ENST00000582293 HIST1H1DP16402 221 aaKnown RBP13.27□□□□□ -0.29
RNF43-206ENST00000582293 HLA-DRB5Q30154 266 aa13.27□□□□□ -0.29
RNF43-206ENST00000582293 C6orf183Q5T699 404 aa13.27□□□□□ -0.29
RNF43-206ENST00000582293 RBMS3Q6XE24 437 aaKnown RBP13.27□□□□□ -0.29
RNF43-206ENST00000582293 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.27□□□□□ -0.29
RNF43-206ENST00000582293 GFOD1Q9NXC2 390 aa13.27□□□□□ -0.29
RNF43-206ENST00000582293 ABRACLQ9P1F3 81 aa13.27□□□□□ -0.29
RNF43-206ENST00000582293 FAM96BQ9Y3D0 163 aa13.27□□□□□ -0.29
RNF43-206ENST00000582293 ETV7Q9Y603 341 aa13.27□□□□□ -0.29
RNF43-206ENST00000582293 METTL21EPA6NDL7 271 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 J3QR06 171 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 RNASE1P07998 156 aaKnown RBP13.26□□□□□ -0.29
RNF43-206ENST00000582293 GNMTQ14749 295 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 SPCS2Q15005 226 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 MINOS1Q5TGZ0 78 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 TRAT1Q6PIZ9 186 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 ZNF554Q86TJ5 538 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 CLVS1Q8IUQ0 354 aaPredicted RBP13.26□□□□□ -0.29
RNF43-206ENST00000582293 CROCCP3Q8IVE0 287 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 PRR18Q8N4B5 295 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 ZNF439Q8NDP4 499 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 OR52M1Q8NGK5 317 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 OR9G1Q8NH87 305 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 ZNF596Q8TC21 504 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 TAF15Q92804 592 aaKnown RBP eCLIP13.26□□□□□ -0.29
RNF43-206ENST00000582293 JMJD8Q96S16 334 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 CHIAQ9BZP6 476 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 Q9N2K0 584 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 C12orf4Q9NQ89 552 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.26□□□□□ -0.29
RNF43-206ENST00000582293 MINOS1-NBL1R4GNA1 71 aa13.26□□□□□ -0.29
RNF43-206ENST00000582293 A0A075B6Q4 140 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 A0A1W2PPE3 182 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 BUB1B-PAK6H3BSN5 160 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 SDCBPO00560 298 aaPredicted RBP13.25□□□□□ -0.29
RNF43-206ENST00000582293 SLC31A2O15432 143 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 GNG10P50151 68 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 ZNF134P52741 427 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 LGALS4P56470 323 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 FAM189A2Q15884 450 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 SSX2Q16385 188 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 ZNF260Q3ZCT1 412 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 TMEM86BQ8N661 226 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 FAM216AQ8WUB2 273 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 ZFAND2BQ8WV99 257 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 SSMEM1Q8WWF3 244 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 MALSU1Q96EH3 234 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 CMSS1Q9BQ75 279 aaKnown RBP13.25□□□□□ -0.29
RNF43-206ENST00000582293 MMP28Q9H239 520 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 DCSTAMPQ9H295 470 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 RIMS4Q9H426 269 aaPredicted RBP13.25□□□□□ -0.29
RNF43-206ENST00000582293 CHMP1AQ9HD42 196 aaPredicted RBP13.25□□□□□ -0.29
RNF43-206ENST00000582293 TNFRSF19Q9NS68 423 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 HILPDAQ9Y5L2 63 aa13.25□□□□□ -0.29
RNF43-206ENST00000582293 TRIM77I1YAP6 450 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 SPINT2O43291 252 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 FCGR3AP08637 254 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 HTR1DP28221 377 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 DIAPH2-AS1Q14236 149 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 CDNFQ49AH0 187 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 OR52L2PQ8NGH6 319 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 OR10V1Q8NGI7 309 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 SETD6Q8TBK2 473 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 C19orf24Q9BVV8 132 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 ABCG5Q9H222 651 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 KCNIP1Q9NZI2 227 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 SCOCQ9UIL1 159 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 POMT1Q9Y6A1 747 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 CEPT1Q9Y6K0 416 aa13.24□□□□□ -0.29
RNF43-206ENST00000582293 IGKV1-6A0A0C4DH72 117 aa13.23□□□□□ -0.29
RNF43-206ENST00000582293 SERPINE3A8MV23 424 aa13.23□□□□□ -0.29
RNF43-206ENST00000582293 VGLL3A8MV65 326 aa13.23□□□□□ -0.29
RNF43-206ENST00000582293 H3BUX3 64 aa13.23□□□□□ -0.29
RNF43-206ENST00000582293 TOR1AO14656 332 aa13.23□□□□□ -0.29
RNF43-206ENST00000582293 SSX5O60225 188 aa13.23□□□□□ -0.29
RNF43-206ENST00000582293 SCTP09683 121 aa13.23□□□□□ -0.29
RNF43-206ENST00000582293 RAB13P51153 203 aa13.23□□□□□ -0.29
RNF43-206ENST00000582293 TMBIM6P55061 237 aa13.23□□□□□ -0.29
RNF43-206ENST00000582293 HLA-DRB3P79483 266 aa13.23□□□□□ -0.29
RNF43-206ENST00000582293 HTD2P86397 168 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms