RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 OR10K2Q6IF99 312 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 BAIAP2L2Q6UXY1 529 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 LIAT1Q6ZQX7 453 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 SLC16A12Q6ZSM3 486 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 OR2W3Q7Z3T1 314 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 LYG1Q8N1E2 194 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 DTX3Q8N9I9 347 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 OR4P4Q8NGL7 312 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 OR9G1Q8NH87 305 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 RFESDQ8TAC1 157 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 GFI1Q99684 422 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 URM1Q9BTM9 101 aaKnown RBP12.88□□□□□ -0.35
VAPA-204ENST00000577901 ZNF286AQ9HBT8 521 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 DPM3Q9P2X0 92 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 HILPDAQ9Y5L2 63 aa12.88□□□□□ -0.35
VAPA-204ENST00000577901 UBE2QL1A1L167 161 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 TMEM14DPA8MWL7 114 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 RRP9O43818 475 aaKnown RBP12.87□□□□□ -0.35
VAPA-204ENST00000577901 ORC5O43913 435 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 CHST1O43916 411 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 IGLV1-47P01700 117 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 SSTR5P35346 364 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 ARHGDIBP52566 201 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 QRFPP83859 136 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 LTC4SQ16873 150 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 NSUN5P1Q3KNT7 163 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 PLA1AQ53H76 456 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 OXLD1Q5BKU9 147 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 NKAPLQ5M9Q1 402 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 LDLRAD2Q5SZI1 272 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 SYT6Q5T7P8 510 aaPredicted RBP12.87□□□□□ -0.35
VAPA-204ENST00000577901 SIGIRRQ6IA17 410 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 DYNAPQ8N1N2 210 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 PIFOQ8TCI5 191 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 MRAPQ8TCY5 172 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 ARL11Q969Q4 196 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 TM2D1Q9BX74 207 aa12.87□□□□□ -0.35
VAPA-204ENST00000577901 KMT2CQ8NEZ4 4911 aaKnown RBP12.87□□□□□ -0.35
VAPA-204ENST00000577901 FBXO24O75426 580 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 DYNLT3P51808 116 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 UNC119Q13432 240 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 HLA-DRB5Q30154 266 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 C2orf76Q3KRA6 126 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 C6orf183Q5T699 404 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 C22orf42Q6IC83 251 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 TRAT1Q6PIZ9 186 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 OR4K15Q8NH41 348 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 PITPNC1Q9UKF7 332 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 STUB1Q9UNE7 303 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 SSR3Q9UNL2 185 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 AMMECR1Q9Y4X0 333 aaPredicted RBP12.86□□□□□ -0.35
VAPA-204ENST00000577901 KIAA2026Q5HYC2 2103 aa12.86□□□□□ -0.35
VAPA-204ENST00000577901 BUB1B-PAK6H3BSN5 160 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 J3QR06 171 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 SPINT2O43291 252 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 CD28P10747 220 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 RAB3BP20337 219 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 BLVRBP30043 206 aaPredicted RBP12.85□□□□□ -0.35
VAPA-204ENST00000577901 FGF9P31371 208 aaPredicted RBP12.85□□□□□ -0.35
VAPA-204ENST00000577901 BRS3P32247 399 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 RAB13P51153 203 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 LOXL3P58215 753 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 NEDD8Q15843 81 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 GAPTQ8N292 157 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 OR51D1Q8NGF3 324 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 OR52M1Q8NGK5 317 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 FAM3DQ96BQ1 224 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 MMP28Q9H239 520 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 ZNF702PQ9H963 129 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 PLEKHJ1Q9NW61 149 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 KCNIP1Q9NZI2 227 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 STEAP1Q9UHE8 339 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 PLXNB1O43157 2135 aa12.85□□□□□ -0.35
VAPA-204ENST00000577901 C15orf65H3BRN8 121 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 F2RL2O00254 374 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 SDCBPO00560 298 aaPredicted RBP12.84□□□□□ -0.35
VAPA-204ENST00000577901 TNFAIP8O95379 198 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 CHATP28329 748 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 CLDN12P56749 244 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 HABP2Q14520 560 aaPredicted RBP12.84□□□□□ -0.35
VAPA-204ENST00000577901 TMEM30BQ3MIR4 351 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 HES5Q5TA89 166 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 CCDC144NLQ6NUI1 221 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 LEAP2Q969E1 77 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 NICN1Q9BSH3 213 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 FAAP24Q9BTP7 215 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 LPAR5Q9H1C0 372 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 KCNK15Q9H427 330 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 VCX3AQ9NNX9 186 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 SERTAD4Q9NUC0 356 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 TXNL4BQ9NX01 149 aaKnown RBP12.84□□□□□ -0.35
VAPA-204ENST00000577901 PSG11Q9UQ72 335 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 TCF19Q9Y242 345 aa12.84□□□□□ -0.35
VAPA-204ENST00000577901 A0A087WXM4 84 aa12.83□□□□□ -0.36
VAPA-204ENST00000577901 SHISA3A0PJX4 238 aa12.83□□□□□ -0.36
VAPA-204ENST00000577901 IFITM5A6NNB3 132 aa12.83□□□□□ -0.36
VAPA-204ENST00000577901 OOSP1A8MZH6 123 aa12.83□□□□□ -0.36
VAPA-204ENST00000577901 C12orf77C9JDV5 145 aa12.83□□□□□ -0.36
VAPA-204ENST00000577901 IGHV3-7P01780 117 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms