RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 UNC13CQ8NB66 2214 aa8.29□□□□□ -1.08
CCDC40-212ENST00000574799 DXOO77932 396 aaKnown RBP8.28□□□□□ -1.08
CCDC40-212ENST00000574799 TDGF1P13385 188 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 TMEM256Q8N2U0 113 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 TSTD1Q8NFU3 115 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 OR10S1Q8NGN2 331 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 MRPL30Q8TCC3 161 aaKnown RBP8.28□□□□□ -1.08
CCDC40-212ENST00000574799 ASB10Q8WXI3 467 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 DDIT4LQ96D03 193 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 RBM24Q9BX46 236 aaKnown RBP8.28□□□□□ -1.08
CCDC40-212ENST00000574799 GLRX2Q9NS18 164 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 LYRM2Q9NU23 88 aaPredicted RBP8.28□□□□□ -1.08
CCDC40-212ENST00000574799 MDFIC2A0A1B0GVS7 189 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 DUXBA0A1W2PPF3 345 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 CEACAM6P40199 344 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 SHISA6Q6ZSJ9 500 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 TBC1D26Q86UD7 250 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 CALHM1Q8IU99 346 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 CPEB3Q8NE35 698 aaKnown RBP8.28□□□□□ -1.08
CCDC40-212ENST00000574799 ZCCHC14Q8WYQ9 949 aaKnown RBP8.28□□□□□ -1.08
CCDC40-212ENST00000574799 DNASE2BQ8WZ79 361 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 SGCZQ96LD1 299 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 OR51B6Q9H340 312 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 TMEM242Q9NWH2 141 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 ZNF586Q9NXT0 402 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 RNF150Q9ULK6 438 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 PPIAL4AQ9Y536 164 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 RP1L1Q8IWN7 2480 aaPredicted RBP8.28□□□□□ -1.08
CCDC40-212ENST00000574799 UBE2L5PA0A1B0GUS4 154 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 TRDCB7Z8K6 153 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 LMO7DNF2Z398 122 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 CRYABP02511 175 aaKnown RBP8.28□□□□□ -1.08
CCDC40-212ENST00000574799 IGKV3-11P04433 115 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 OR5G3P0C626 314 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 BAXQ07812 192 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 LMX1AQ8TE12 382 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 CDH20Q9HBT6 801 aa8.28□□□□□ -1.08
CCDC40-212ENST00000574799 PIAS2O75928 621 aa8.27□□□□□ -1.08
CCDC40-212ENST00000574799 IL18BPO95998 194 aa8.27□□□□□ -1.08
CCDC40-212ENST00000574799 GYPAP02724 150 aa8.27□□□□□ -1.08
CCDC40-212ENST00000574799 MDH2P40926 338 aaKnown RBP8.27□□□□□ -1.08
CCDC40-212ENST00000574799 OR1D5P58170 312 aa8.27□□□□□ -1.08
CCDC40-212ENST00000574799 UBE2G2P60604 165 aa8.27□□□□□ -1.08
CCDC40-212ENST00000574799 DCAF7P61962 342 aa8.27□□□□□ -1.08
CCDC40-212ENST00000574799 MEF2BQ02080 365 aaPredicted RBP8.27□□□□□ -1.08
CCDC40-212ENST00000574799 RSPO4Q2I0M5 234 aaPredicted RBP8.27□□□□□ -1.08
CCDC40-212ENST00000574799 SMIM15Q7Z3B0 74 aa8.27□□□□□ -1.08
CCDC40-212ENST00000574799 OR5AU1Q8NGC0 362 aa8.27□□□□□ -1.08
CCDC40-212ENST00000574799 RCC1LQ96I51 464 aaKnown RBP8.27□□□□□ -1.08
CCDC40-212ENST00000574799 MANBALQ9NQG1 85 aa8.27□□□□□ -1.08
CCDC40-212ENST00000574799 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 B4E171 279 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 PPYP01298 95 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 MSX1P28360 303 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 BRS3P32247 399 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 TSPAN7P41732 249 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 MFAP5Q13361 173 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 MMDQ15546 238 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 GBGT1Q8N5D6 347 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 ADIPOR1Q96A54 375 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 MRGPRX4Q96LA9 322 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 FBLN5Q9UBX5 448 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 KCNS2Q9ULS6 477 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 ST3GAL6Q9Y274 331 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 BDP1A6H8Y1 2624 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 TMEM210A6NLX4 147 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF732B4DXR9 585 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 PROB1E7EW31 1015 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 PMCHP20382 165 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 KITLGP21583 273 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 GALNSP34059 522 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 HINT1P49773 126 aaPredicted RBP8.27□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF90Q03938 601 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 GAGE1Q13065 139 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 CISD2Q8N5K1 135 aaKnown RBP8.27□□□□□ -1.09
CCDC40-212ENST00000574799 NOXO1Q8NFA2 376 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 OR1L3Q8NH93 324 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 IL1F10Q8WWZ1 152 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 SLC35E1Q96K37 410 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 PSENENQ9NZ42 101 aa8.27□□□□□ -1.09
CCDC40-212ENST00000574799 COLQQ9Y215 455 aaPredicted RBP8.27□□□□□ -1.09
CCDC40-212ENST00000574799 IGHV1OR21-1A0A087WYE8 117 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 CLDN1O95832 211 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 CRISP2P16562 243 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 DTYMKP23919 212 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 MRPS11P82912 194 aaKnown RBP8.26□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF468Q5VIY5 522 aaPredicted RBP8.26□□□□□ -1.09
CCDC40-212ENST00000574799 TGIF2LYQ8IUE0 185 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 OR2V1Q8NHB1 315 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF721Q8TF20 911 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 STARD4Q96DR4 205 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 PARLQ9H300 379 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 OR6C3Q9NZP0 311 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 DOCK11Q5JSL3 2073 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 TMEM265A0A087WTH1 108 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 IGKV1-9A0A0C4DH69 117 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 A0A1W2PNR3 127 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 OR6C6A6NF89 314 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 NTF3P20783 257 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 IZUMO4Q1ZYL8 232 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms