RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 MANBALQ9NQG1 85 aa8.31□□□□□ -1.08
USP6-204ENST00000572949 PRDM7Q9NQW5 492 aa8.31□□□□□ -1.08
USP6-204ENST00000572949 IGHV3-72A0A0B4J1Y9 119 aa8.31□□□□□ -1.08
USP6-204ENST00000572949 ZAR1LA6NP61 321 aa8.31□□□□□ -1.08
USP6-204ENST00000572949 PNLIPP16233 465 aa8.31□□□□□ -1.08
USP6-204ENST00000572949 GTSCR1Q86UQ5 136 aa8.31□□□□□ -1.08
USP6-204ENST00000572949 LRP11Q86VZ4 500 aa8.31□□□□□ -1.08
USP6-204ENST00000572949 WDR54Q9H977 334 aa8.31□□□□□ -1.08
USP6-204ENST00000572949 RNF122Q9H9V4 155 aa8.31□□□□□ -1.08
USP6-204ENST00000572949 PGPEP1Q9NXJ5 209 aa8.31□□□□□ -1.08
USP6-204ENST00000572949 LOC102724200A0A096LPH7 203 aaPredicted RBP8.3□□□□□ -1.08
USP6-204ENST00000572949 ARF6P62330 175 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 OR4C13Q8NGP0 309 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 ASB10Q8WXI3 467 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 MEGF10Q96KG7 1140 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 SNURFLB1AK76 121 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 B4E171 279 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 ADRB1P08588 477 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 PRDX2P32119 198 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 MC5RP33032 325 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 TSPAN7P41732 249 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 FLVCR2Q9UPI3 526 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 NDUFA2O43678 99 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 NKX2-2O95096 273 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 WDR38Q5JTN6 314 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 MYO7BQ6PIF6 2116 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 TCTEX1D1Q8N7M0 179 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 SHISA4Q96DD7 197 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 TRAV1-2A0A0B4J238 106 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 SP9P0CG40 484 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 FABP5Q01469 135 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 ZNF56Q15929 161 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 B3GNT9Q6UX72 402 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 LYRM2Q9NU23 88 aaPredicted RBP8.3□□□□□ -1.08
USP6-204ENST00000572949 KDM3BQ7LBC6 1761 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 A0A1W2PPE3 182 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 TCL1AP56279 114 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 RELQ04864 619 aaPredicted RBP8.3□□□□□ -1.08
USP6-204ENST00000572949 TMEM183BQ1AE95 376 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 ARL6IP6Q8N6S5 226 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 SIGLEC1Q9BZZ2 1709 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 A0A0B4J2E0 115 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 TMEM272A0A1B0GTI8 110 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 A0A1B0GX12 115 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 RPLP1P05386 114 aaKnown RBP8.3□□□□□ -1.08
USP6-204ENST00000572949 GPX1P07203 203 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 DYNLT3P51808 116 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 WNT3P56703 355 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 HIST3H3Q16695 136 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 OR8B12Q8NGG6 310 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 TBX15Q96SF7 602 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 WIPI2Q9Y4P8 454 aa8.3□□□□□ -1.08
USP6-204ENST00000572949 MYO16Q9Y6X6 1858 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 TRAV34A0A0B4J273 112 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 PPIAL4CA0A0B4J2A2 164 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 PPIAL4GP0DN37 164 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 CTLA4P16410 223 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 RPL27AP46776 148 aaKnown RBP8.29□□□□□ -1.08
USP6-204ENST00000572949 SUMO2P61956 95 aaKnown RBP8.29□□□□□ -1.08
USP6-204ENST00000572949 OR8G5Q8NG78 346 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 NAA50Q9GZZ1 169 aaKnown RBP8.29□□□□□ -1.08
USP6-204ENST00000572949 CACNA1BQ00975 2339 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 KCNE1BA0A087WTH5 132 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 ISLRO14498 428 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 TGFAP01135 160 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 FAM157CP0CG43 387 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 DEGS2Q6QHC5 323 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 BVESQ8NE79 360 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 ASB13Q8WXK3 278 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 FOXD3Q9UJU5 478 aaPredicted RBP8.29□□□□□ -1.08
USP6-204ENST00000572949 HYPMO75409 117 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 DNAL4O96015 105 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 B4GALNT1Q00973 533 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 FAM74A4Q5TZK3 123 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 DLEU7Q6UYE1 221 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 ZNF561Q8N587 486 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 C10orf90Q96M02 699 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 SLC52A3Q9NQ40 469 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 DOCK8Q8NF50 2099 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 ELOBQ15370 118 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 GABRA6Q16445 453 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 BAK1Q16611 211 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 C19orf43Q9BQ61 176 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 OR2H1Q9GZK4 316 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 SH3BGRL3Q9H299 93 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 AUNIPQ9H7T9 357 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 SIRT7Q9NRC8 400 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 STARD10Q9Y365 291 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 PSMB11A5LHX3 300 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 NUDT3O95989 172 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 HOXB3P14651 431 aaPredicted RBP8.29□□□□□ -1.08
USP6-204ENST00000572949 EEF1AKMT3Q96AZ1 226 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 GPA33Q99795 319 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 KLK11Q9UBX7 282 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 LSM6P62312 80 aaKnown RBP8.29□□□□□ -1.08
USP6-204ENST00000572949 PCOLCEQ15113 449 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 FAM27D1Q5T7N8 215 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 TEPPQ6URK8 271 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 FAM214BQ7L5A3 538 aa8.29□□□□□ -1.08
USP6-204ENST00000572949 ZDHHC22Q8N966 263 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms