RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 AMY1AP04745 511 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 AMY2AP04746 511 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 UBBP0CG47 229 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 CD1BP29016 333 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 GP2P55259 537 aaKnown RBP7.74□□□□□ -1.17
CIITA-207ENST00000571545 ADARB1P78563 741 aaKnown RBP7.74□□□□□ -1.17
CIITA-207ENST00000571545 GPR50Q13585 617 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 EBI3Q14213 229 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 RCN1Q15293 331 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 OXLD1Q5BKU9 147 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 STEAP3Q658P3 488 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 GLIPR1L1Q6UWM5 242 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 SLC35E3Q7Z769 313 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 MOB3BQ86TA1 216 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 MS4A15Q8N5U1 240 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 LEAP2Q969E1 77 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 PLCXD1Q9NUJ7 323 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 LIN7CQ9NUP9 197 aaKnown RBP7.74□□□□□ -1.17
CIITA-207ENST00000571545 ETAA1Q9NY74 926 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 KCNIP1Q9NZI2 227 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 GNG12Q9UBI6 72 aa7.74□□□□□ -1.17
CIITA-207ENST00000571545 ERICH4A6NGS2 130 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 NCBP2LA6PVI3 153 aaKnown RBP7.73□□□□□ -1.17
CIITA-207ENST00000571545 C15orf65H3BRN8 121 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 RGS11O94810 467 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 MOSP00540 346 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 IGHV3-7P01780 117 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 IGHG2P01859 326 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 MT-ND4P03905 459 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 MGMTP16455 207 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 CELP19835 753 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 FUT3P21217 361 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 ZNF137PP52743 207 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 RPS11P62280 158 aaKnown RBP eCLIP7.73□□□□□ -1.17
CIITA-207ENST00000571545 RPL23AP62750 156 aaKnown RBP7.73□□□□□ -1.17
CIITA-207ENST00000571545 SYT6Q5T7P8 510 aaPredicted RBP7.73□□□□□ -1.17
CIITA-207ENST00000571545 RAB12Q6IQ22 244 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 TEX38Q6PEX7 206 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 Q6ZPA2 131 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 AHSA2Q719I0 299 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 ZNF485Q8NCK3 441 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 OR13C5Q8NGS8 318 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 RTN4IP1Q8WWV3 396 aaPredicted RBP7.73□□□□□ -1.17
CIITA-207ENST00000571545 GGHQ92820 318 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 MUL1Q969V5 352 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 DERL3Q96Q80 235 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 MND1Q9BWT6 205 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 CLEC2DQ9UHP7 191 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 PSORS1C1Q9UIG5 152 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 LRRC42Q9Y546 428 aa7.73□□□□□ -1.17
CIITA-207ENST00000571545 SIRT4Q9Y6E7 314 aaPredicted RBP7.73□□□□□ -1.17
CIITA-207ENST00000571545 TRAV8-7A0A075B6U6 113 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 NUDT19A8MXV4 375 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 CASQ2O14958 399 aaPredicted RBP7.72□□□□□ -1.17
CIITA-207ENST00000571545 CRTAPO75718 401 aaPredicted RBP7.72□□□□□ -1.17
CIITA-207ENST00000571545 SC5DO75845 299 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 LALBAP00709 142 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 MAS1P04201 325 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 OR5H8P0DN80 308 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 TCTEX1D4Q5JR98 221 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 OGFRL1Q5TC84 451 aaPredicted RBP7.72□□□□□ -1.17
CIITA-207ENST00000571545 FOXB2Q5VYV0 432 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 RNLSQ5VYX0 342 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 GLT8D1Q68CQ7 371 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 HIST2H2BDQ6DRA6 164 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 SLC25A48Q6ZT89 311 aaKnown RBP7.72□□□□□ -1.17
CIITA-207ENST00000571545 GAPTQ8N292 157 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 STPG2Q8N412 459 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 ZFP41Q8N8Y5 198 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 FBLIM1Q8WUP2 373 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 PHYHIPQ92561 330 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 Q96M66 194 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 NEDD4LQ96PU5 975 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 RASL11BQ9BPW5 248 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 CHCHD6Q9BRQ6 235 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 SELENOIQ9C0D9 397 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 ABCG5Q9H222 651 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 AURKAIP1Q9NWT8 199 aaPredicted RBP7.72□□□□□ -1.17
CIITA-207ENST00000571545 JPT1Q9UK76 154 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 PEX16Q9Y5Y5 336 aa7.72□□□□□ -1.17
CIITA-207ENST00000571545 PNMA8CA0A1B0GUJ8 204 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 MAGEA13PA6NCF6 341 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 C12orf77C9JDV5 145 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 LANCL1O43813 399 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 PDCD6O75340 191 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 HBZP02008 142 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 IGLL1P15814 213 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 MYCNOSP40205 109 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 GPR12P47775 334 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 REG1BP48304 166 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 HTD2P86397 168 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 HNF4GQ14541 408 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 CXorf66Q5JRM2 361 aaPredicted RBP7.71□□□□□ -1.18
CIITA-207ENST00000571545 MOB1BQ7L9L4 216 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 OR2W3Q7Z3T1 314 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 PRR18Q8N4B5 295 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 NANOGP1Q8N7R0 232 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 KLHL30-AS1Q8NEE0 82 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 BPIFB6Q8NFQ5 453 aa7.71□□□□□ -1.18
CIITA-207ENST00000571545 CCDC107Q8WV48 283 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms