RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 VSIG8P0DPA2 414 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 CD37P11049 281 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 RCC1P18754 421 aaPredicted RBP4.3□□□□□ -1.72
CHD3-212ENST00000570758 FUT3P21217 361 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 CRHBPP24387 322 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 MAPK3P27361 379 aaPredicted RBP4.3□□□□□ -1.72
CHD3-212ENST00000570758 HTR2CP28335 458 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 RAB7AP51149 207 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 ARHGDIBP52566 201 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 RPS25P62851 125 aaKnown RBP4.3□□□□□ -1.72
CHD3-212ENST00000570758 QRFPP83859 136 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 UNC119Q13432 240 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 MADCAM1Q13477 382 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 GPR50Q13585 617 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 TPBGQ13641 420 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 GNMTQ14749 295 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 PDLIM3Q53GG5 364 aaPredicted RBP4.3□□□□□ -1.72
CHD3-212ENST00000570758 HSD17B12Q53GQ0 312 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 ARSJQ5FYB0 599 aaPredicted RBP4.3□□□□□ -1.72
CHD3-212ENST00000570758 TCTEX1D4Q5JR98 221 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 RBM48Q5RL73 367 aaKnown RBP4.3□□□□□ -1.72
CHD3-212ENST00000570758 SYT6Q5T7P8 510 aaPredicted RBP4.3□□□□□ -1.72
CHD3-212ENST00000570758 IZUMO2Q6UXV1 221 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 TMEM91Q6ZNR0 172 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 NDUFA11Q86Y39 141 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 THNSL2Q86YJ6 484 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 OR8H3Q8N146 312 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 MS4A15Q8N5U1 240 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 LINC00311Q8N616 119 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 NKAIN3Q8N8D7 197 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 ZNF439Q8NDP4 499 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 OR10V1Q8NGI7 309 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 OR52M1Q8NGK5 317 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 OR10X1Q8NGY0 326 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 PHYHIPQ92561 330 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 THRSPQ92748 146 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 UFD1Q92890 307 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 TMEM203Q969S6 136 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 ST6GALNAC6Q969X2 333 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 FAM46BQ96A09 425 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 SULT4A1Q9BR01 284 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 SPACA1Q9HBV2 294 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 ISYNA1Q9NPH2 558 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 TRAPPC2LQ9UL33 140 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 MOB4Q9Y3A3 225 aa4.3□□□□□ -1.72
CHD3-212ENST00000570758 A0A0A6YYD4 124 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 IGHV1-3A0A0C4DH29 117 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 TMEM14DPA8MWL7 114 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 ZNF736B4DX44 427 aaPredicted RBP4.29□□□□□ -1.72
CHD3-212ENST00000570758 H3BUI4 141 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 CCRL2O00421 344 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 SLC22A1O15245 554 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 RGS10O43665 173 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 IGKV1D-33P01593 117 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 IGKV1-33P01594 117 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 GAPDHP04406 335 aaKnown RBP4.29□□□□□ -1.72
CHD3-212ENST00000570758 GLAP06280 429 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 UBBP0CG47 229 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 FAM106CPP0CH98 169 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 HSMCR30P0CW71 290 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 CPEP16870 476 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 TMEM11P17152 192 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 SRMP19623 302 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 CHATP28329 748 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 ZNF134P52741 427 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 RPS27AP62979 156 aaKnown RBP4.29□□□□□ -1.72
CHD3-212ENST00000570758 CD83Q01151 205 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 FABP5Q01469 135 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 ZNF816Q0VGE8 651 aaPredicted RBP4.29□□□□□ -1.72
CHD3-212ENST00000570758 EBI3Q14213 229 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 HES1Q14469 280 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 HNF4GQ14541 408 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 P2RY14Q15391 338 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 BEAN1Q3B7T3 259 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 CT45A1Q5HYN5 189 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 C9orf152Q5JTZ5 239 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 NKAPLQ5M9Q1 402 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 C6orf183Q5T699 404 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 SAMD5Q5TGI4 173 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 GLT8D1Q68CQ7 371 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 Q6ZPA2 131 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 SLC25A48Q6ZT89 311 aaKnown RBP4.29□□□□□ -1.72
CHD3-212ENST00000570758 C6orf201Q7Z4U5 140 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 CENPVQ7Z7K6 275 aaPredicted RBP4.29□□□□□ -1.72
CHD3-212ENST00000570758 MOB3BQ86TA1 216 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 PRR18Q8N4B5 295 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 C5orf56Q8N8D9 126 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 C8orf31Q8N9H6 132 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 OR5AU1Q8NGC0 362 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 OR52L2PQ8NGH6 319 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 CT45A3Q8NHU0 189 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 MRPL30Q8TCC3 161 aaKnown RBP4.29□□□□□ -1.72
CHD3-212ENST00000570758 RTN4IP1Q8WWV3 396 aaPredicted RBP4.29□□□□□ -1.72
CHD3-212ENST00000570758 EAF1Q96JC9 268 aaPredicted RBP4.29□□□□□ -1.72
CHD3-212ENST00000570758 AKR1E2Q96JD6 320 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 CNBD2Q96M20 576 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 NICN1Q9BSH3 213 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 FAAP24Q9BTP7 215 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 TM2D1Q9BX74 207 aa4.29□□□□□ -1.72
CHD3-212ENST00000570758 CCDC90BQ9GZT6 254 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms