RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 PDCD5O14737 125 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 IGHV3-7P01780 117 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 RCC1P18754 421 aaPredicted RBP8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 CEACAM3P40198 252 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 RANBP1P43487 201 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 KIR2DS4P43632 304 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 CLDN12P56749 244 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 OR10A3P58181 314 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 PROK1P58294 105 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 LTC4SQ16873 150 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 C2orf76Q3KRA6 126 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 NKAPLQ5M9Q1 402 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 C6orf183Q5T699 404 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 TPTE2P1Q5T6R2 138 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 C22orf42Q6IC83 251 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 TRAT1Q6PIZ9 186 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 C6orf201Q7Z4U5 140 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 ZNF554Q86TJ5 538 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 NR2C2APQ86WQ0 139 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 LINC00311Q8N616 119 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 C8orf31Q8N9H6 132 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 MRPL30Q8TCC3 161 aaKnown RBP8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 FAM3DQ96BQ1 224 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 URM1Q9BTM9 101 aaKnown RBP8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 FAAP24Q9BTP7 215 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 RANBP3Q9H6Z4 567 aaPredicted RBP8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 RAB9BQ9NP90 201 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 TXNL4BQ9NX01 149 aaKnown RBP8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 GFOD1Q9NXC2 390 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 STEAP1Q9UHE8 339 aa8.9□□□□□ -0.98
SHCBP1-207ENST00000569702 IFITM5A6NNB3 132 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 SDCBPO00560 298 aaPredicted RBP8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 SOCS1O15524 211 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 SPINT2O43291 252 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 NAPSAO96009 420 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 HBZP02008 142 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 RAB3BP20337 219 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 MYL9P24844 172 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 BLVRBP30043 206 aaPredicted RBP8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 BRS3P32247 399 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 TMEM50BP56557 158 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 KRTAP10-3P60369 221 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 TMEM30BQ3MIR4 351 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 Q3ZCU0 254 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 HES5Q5TA89 166 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 FAM53AQ6NSI3 398 aaPredicted RBP8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 CCDC144NLQ6NUI1 221 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 TMEM219Q86XT9 240 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 UBALD1Q8TB05 177 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 TAF9BQ9HBM6 251 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 HSF4Q9ULV5 492 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 STUB1Q9UNE7 303 aa8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 AMMECR1Q9Y4X0 333 aaPredicted RBP8.89□□□□□ -0.99
SHCBP1-207ENST00000569702 TMEM272A0A1B0GTI8 110 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 A0A1W2PPE3 182 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 FAM90A9PA6NNJ1 464 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 GNG10P50151 68 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 ARHGDIBP52566 201 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 SRSF4Q08170 494 aaKnown RBP8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 PLA2G7Q13093 441 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 MADCAM1Q13477 382 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 NEDD8Q15843 81 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 FBLN7Q53RD9 439 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 ZNF880Q6PDB4 577 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 Q6ZPA2 131 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 Q8N2B8 174 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 DTX3Q8N9I9 347 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 ZNF439Q8NDP4 499 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 OR4C13Q8NGP0 309 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 OR1L1Q8NH94 360 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 SGMS2Q8NHU3 365 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 RPEQ96AT9 228 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 CITED1Q99966 193 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 OCSTAMPQ9BR26 566 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 NPFFR1Q9GZQ6 430 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 OR51E2Q9H255 320 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 PLEKHJ1Q9NW61 149 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 RAB22AQ9UL26 194 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 SSR3Q9UNL2 185 aa8.88□□□□□ -0.99
SHCBP1-207ENST00000569702 NBEAL1Q6ZS30 2694 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 TRBV6-6A0A0A6YYG2 114 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 IGHV3-43A0A0B4J1X8 118 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 A0A1W2PPI3 338 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 TNFAIP8O95379 198 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 IGHV3-43DP0DP04 118 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 CD24P25063 80 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 MNDAP41218 407 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 VEGFCP49767 419 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 RAB7AP51149 207 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 ZNF134P52741 427 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 EFNB2P52799 333 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 HTD2P86397 168 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 DIAPH2-AS1Q14236 149 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 HABP2Q14520 560 aaPredicted RBP8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 HMGN3Q15651 99 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 PLAC9Q5JTB6 97 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 STEAP3Q658P3 488 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 SLC25A48Q6ZT89 311 aaKnown RBP8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 C16orf82Q7Z2V1 217 aa8.87□□□□□ -0.99
SHCBP1-207ENST00000569702 C5orf24Q7Z6I8 188 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms