RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 SLC2A9Q9NRM0 540 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 COL1A2P08123 1366 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 PALLDQ8WX93 1383 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 KBTBD11-OT1A0A1B0GTJ5 212 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 MGAT4DA6NG13 374 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 SEC14L6B5MCN3 397 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 C5orf58C9J3I9 102 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 BCKDKO14874 412 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 KLRC4O43908 158 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 FCN3O75636 299 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 SCELO95171 688 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 MT-ND4LP03901 98 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 SOD3P08294 240 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 C1GALT1C1LP0DN25 315 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 GZMBP10144 247 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 UCHL3P15374 230 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 FGF7P21781 194 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 MRPL19P49406 292 aaKnown RBP3.87□□□□□ -1.79
UBR1-208ENST00000569066 AKR1C2P52895 323 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 HCCSP53701 268 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 RAB11AP62491 216 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 AKR1C1Q04828 323 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 SHHQ15465 462 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 RAB11BQ15907 218 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 TBPL2Q6SJ96 375 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 ASCL4Q6XD76 172 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 OR4S2Q8NH73 311 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 EEF1AKMT3Q96AZ1 226 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 FAM3DQ96BQ1 224 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 TP53RKQ96S44 253 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 ACTR3CQ9C0K3 210 aaPredicted RBP3.87□□□□□ -1.79
UBR1-208ENST00000569066 MED28Q9H204 178 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 ARV1Q9H2C2 271 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 CLN8Q9UBY8 286 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 SS18L2Q9UHA2 77 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 RAB22AQ9UL26 194 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 OR51B4Q9Y5P0 310 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 GLI2P10070 1586 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 CEP170Q5SW79 1584 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 ABCA6Q8N139 1617 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 ARHGEF28Q8N1W1 1705 aaKnown RBP3.87□□□□□ -1.79
UBR1-208ENST00000569066 ZNF638Q14966 1978 aaKnown RBP3.87□□□□□ -1.79
UBR1-208ENST00000569066 INMT-MINDY4F8WBC2 141 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 KDELR3O43731 214 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 ORC5O43913 435 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 IFNA5P01569 189 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 IGLV2-23P01705 113 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 SERPINE2P07093 398 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 LHX2P50458 406 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 RAB7AP51149 207 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 IDNKQ5T6J7 187 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 TPTE2P1Q5T6R2 138 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 CRLF3Q8IUI8 442 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 HIST3H2BBQ8N257 126 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 LRRC75AQ8NAA5 344 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 PXT1Q8NFP0 134 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 OR51A7Q8NH64 312 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 GPX8Q8TED1 209 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 ORAOV1Q8WV07 137 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 SFRP2Q96HF1 295 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 OR2M4Q96R27 311 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 ASF1BQ9NVP2 202 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 RBFOX1Q9NWB1 397 aaKnown RBP3.87□□□□□ -1.79
UBR1-208ENST00000569066 DOK5Q9P104 306 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 ANGPT4Q9Y264 503 aa3.87□□□□□ -1.79
UBR1-208ENST00000569066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.87□□□□□ -1.79
UBR1-208ENST00000569066 ANKRD36CQ5JPF3 1778 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 A0A087WUJ7 227 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 PEX7O00628 323 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 CST4P01036 141 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 GTF2F2P13984 249 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 RAB5AP20339 215 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 GADD45AP24522 165 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 CSNK1A1P48729 337 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 NDUFA6P56556 154 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 SP4Q02446 784 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 TPBGQ13641 420 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 JOSD1Q15040 202 aaPredicted RBP3.86□□□□□ -1.79
UBR1-208ENST00000569066 GABRA6Q16445 453 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 PDZD11Q5EBL8 140 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 PLCXD3Q63HM9 321 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 C12orf54Q6X4T0 127 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 TMEM179Q6ZVK1 233 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 GLT6D1Q7Z4J2 308 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 MRPL52Q86TS9 123 aaKnown RBP3.86□□□□□ -1.79
UBR1-208ENST00000569066 TMEM161BQ8NDZ6 487 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 PIH1D2Q8WWB5 315 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 RCN3Q96D15 328 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 MALSU1Q96EH3 234 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 CENPNQ96H22 339 aaPredicted RBP3.86□□□□□ -1.79
UBR1-208ENST00000569066 NRTNQ99748 197 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 SLC38A1Q9H2H9 487 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 SMCO4Q9NRQ5 59 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 TNFSF18Q9UNG2 199 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 TSSC4Q9Y5U2 329 aaPredicted RBP3.86□□□□□ -1.79
UBR1-208ENST00000569066 EDC4Q6P2E9 1401 aaKnown RBP3.86□□□□□ -1.79
UBR1-208ENST00000569066 LTBP1Q14766 1721 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 MEGF6O75095 1541 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 A2MP01023 1474 aa3.86□□□□□ -1.79
UBR1-208ENST00000569066 A0A1B0GVY2 172 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms