RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 TMEM91Q6ZNR0 172 aa16.2■□□□□ 0.18
CLK3-225ENST00000569063 OR8H3Q8N146 312 aa16.2■□□□□ 0.18
CLK3-225ENST00000569063 FAM110DQ8TAY7 271 aaPredicted RBP16.2■□□□□ 0.18
CLK3-225ENST00000569063 TMEM203Q969S6 136 aa16.2■□□□□ 0.18
CLK3-225ENST00000569063 CCDC90BQ9GZT6 254 aa16.2■□□□□ 0.18
CLK3-225ENST00000569063 RAB9BQ9NP90 201 aa16.2■□□□□ 0.18
CLK3-225ENST00000569063 GFOD1Q9NXC2 390 aa16.2■□□□□ 0.18
CLK3-225ENST00000569063 A0A1W2PPE3 182 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 C12orf77C9JDV5 145 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 M0QZK8 103 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 SLC22A1O15245 554 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 SPINT2O43291 252 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 PDCD6O75340 191 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 FBXO24O75426 580 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 VSIG8P0DPA2 414 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 CD28P10747 220 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 PSMA1P25786 263 aaKnown RBP16.19■□□□□ 0.18
CLK3-225ENST00000569063 TMEM30BQ3MIR4 351 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 C6orf183Q5T699 404 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 HIST2H2BDQ6DRA6 164 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 TRAT1Q6PIZ9 186 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 DRAM1Q8N682 238 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 OR4K15Q8NH41 348 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 OR56B4Q8NH76 319 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 UBALD1Q8TB05 177 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 CNBD2Q96M20 576 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 RAB26Q9ULW5 256 aa16.19■□□□□ 0.18
CLK3-225ENST00000569063 UBE2QL1A1L167 161 aa16.18■□□□□ 0.18
CLK3-225ENST00000569063 MPIG6BO95866 241 aa16.18■□□□□ 0.18
CLK3-225ENST00000569063 SNRNP70P08621 437 aaKnown RBP16.18■□□□□ 0.18
CLK3-225ENST00000569063 HTR2CP28335 458 aa16.18■□□□□ 0.18
CLK3-225ENST00000569063 RPS25P62851 125 aaKnown RBP16.18■□□□□ 0.18
CLK3-225ENST00000569063 ZNF816Q0VGE8 651 aaPredicted RBP16.18■□□□□ 0.18
CLK3-225ENST00000569063 TMEM95Q3KNT9 176 aa16.18■□□□□ 0.18
CLK3-225ENST00000569063 ABCA11PQ4W5N1 156 aa16.18■□□□□ 0.18
CLK3-225ENST00000569063 KCNG3Q8TAE7 436 aa16.18■□□□□ 0.18
CLK3-225ENST00000569063 MGLLQ99685 303 aa16.18■□□□□ 0.18
CLK3-225ENST00000569063 MBNL3Q9NUK0 354 aaKnown RBP16.18■□□□□ 0.18
CLK3-225ENST00000569063 HSD17B6O14756 317 aa16.17■□□□□ 0.18
CLK3-225ENST00000569063 WIPF1O43516 503 aa16.17■□□□□ 0.18
CLK3-225ENST00000569063 ATP6V1G2O95670 118 aa16.17■□□□□ 0.18
CLK3-225ENST00000569063 GAPDHP04406 335 aaKnown RBP16.17■□□□□ 0.18
CLK3-225ENST00000569063 RCC1P18754 421 aaPredicted RBP16.17■□□□□ 0.18
CLK3-225ENST00000569063 MAP2K4P45985 399 aa16.17■□□□□ 0.18
CLK3-225ENST00000569063 RPS27AP62979 156 aaKnown RBP16.17■□□□□ 0.18
CLK3-225ENST00000569063 QRFPP83859 136 aa16.17■□□□□ 0.18
CLK3-225ENST00000569063 OR10K2Q6IF99 312 aa16.17■□□□□ 0.18
CLK3-225ENST00000569063 ZNF554Q86TJ5 538 aa16.17■□□□□ 0.18
CLK3-225ENST00000569063 OR6M1Q8NGM8 313 aa16.17■□□□□ 0.18
CLK3-225ENST00000569063 TM2D1Q9BX74 207 aa16.17■□□□□ 0.18
CLK3-225ENST00000569063 BLOC1S6Q9UL45 172 aa16.17■□□□□ 0.18
CLK3-225ENST00000569063 MOB4Q9Y3A3 225 aa16.17■□□□□ 0.18
CLK3-225ENST00000569063 CMYA5Q8N3K9 4069 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 IGHV3-43A0A0B4J1X8 118 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 TMEM14DPA8MWL7 114 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 CCRL2O00421 344 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 ARL6IP5O75915 188 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 HBZP02008 142 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 LPLP06858 475 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 IGHV3-43DP0DP04 118 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 CHATP28329 748 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 DEFA6Q01524 100 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 EMX1Q04741 257 aaPredicted RBP16.16■□□□□ 0.18
CLK3-225ENST00000569063 UNC119Q13432 240 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 TBCEQ15813 527 aaPredicted RBP16.16■□□□□ 0.18
CLK3-225ENST00000569063 FAM53AQ6NSI3 398 aaPredicted RBP16.16■□□□□ 0.18
CLK3-225ENST00000569063 NDUFA11Q86Y39 141 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 ZNF439Q8NDP4 499 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 MRPL30Q8TCC3 161 aaKnown RBP16.16■□□□□ 0.18
CLK3-225ENST00000569063 ST6GALNAC6Q969X2 333 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 CYYR1Q96J86 154 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 NEDD4LQ96PU5 975 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 TMEM59Q9BXS4 323 aa16.16■□□□□ 0.18
CLK3-225ENST00000569063 WNK1Q9H4A3 2382 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 IGHV1-3A0A0C4DH29 117 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 KCNAB3O43448 404 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 BPNT1O95861 308 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 FABP5Q01469 135 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 SLC25A48Q6ZT89 311 aaKnown RBP16.15■□□□□ 0.18
CLK3-225ENST00000569063 PRR18Q8N4B5 295 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 OR1L1Q8NH94 360 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 GFI1Q99684 422 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 CITED2Q99967 270 aaPredicted RBP16.15■□□□□ 0.18
CLK3-225ENST00000569063 SULT4A1Q9BR01 284 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 TAF9BQ9HBM6 251 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 ACOT13Q9NPJ3 140 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 GNG12Q9UBI6 72 aa16.15■□□□□ 0.18
CLK3-225ENST00000569063 SLC17A2O00624 439 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 OPN1MWP04001 364 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 OPN1MW2P0DN77 364 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 OPN1MW3P0DN78 364 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 TMEM11P17152 192 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 IL3RAP26951 378 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 ZNF134P52741 427 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 ZNF137PP52743 207 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 EBI3Q14213 229 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 HES1Q14469 280 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 NKAPLQ5M9Q1 402 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 STEAP3Q658P3 488 aa16.14■□□□□ 0.17
CLK3-225ENST00000569063 ZNF367Q7RTV3 350 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms