RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 BRS3P32247 399 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 GLP1RP43220 463 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 RANBP1P43487 201 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 RAB7AP51149 207 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 SRSF4Q08170 494 aaKnown RBP6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 ZNF816Q0VGE8 651 aaPredicted RBP6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 SYT6Q5T7P8 510 aaPredicted RBP6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 BRICD5Q6PL45 260 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 OR8H3Q8N146 312 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 OR4C13Q8NGP0 309 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 RFESDQ8TAC1 157 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 NDNFQ8TB73 568 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 MRPL30Q8TCC3 161 aaKnown RBP6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 TMEM203Q969S6 136 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 RBM14Q96PK6 669 aaKnown RBP6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 OCSTAMPQ9BR26 566 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 LPAR5Q9H1C0 372 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 Q9H521 79 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 RAB9BQ9NP90 201 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 ABCB10Q9NRK6 738 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 ETAA1Q9NY74 926 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 HSF4Q9ULV5 492 aa6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 AMMECR1Q9Y4X0 333 aaPredicted RBP6.55□□□□□ -1.36
HDGFL3-205ENST00000568129 A0A0A6YYD4 124 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 TRAV39A0A0B4J263 110 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 SHISA3A0PJX4 238 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 C12orf77C9JDV5 145 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 AIPO00170 330 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 TIMM23O14925 209 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 OR2F2O95006 317 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 NFYBP25208 207 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 ZNF134P52741 427 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 TMEM50BP56557 158 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 BLCAPP62952 87 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 HTD2P86397 168 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 MADCAM1Q13477 382 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 HERPUD1Q15011 391 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 FBLN7Q53RD9 439 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 C6orf183Q5T699 404 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 OR10K2Q6IF99 312 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 Q6ZPA2 131 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 SLC25A48Q6ZT89 311 aaKnown RBP6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 SVOPQ8N4V2 548 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 OR2T6Q8NHC8 308 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 FCGR1BQ92637 280 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 ARL11Q969Q4 196 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 CYYR1Q96J86 154 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 TMEM59Q9BXS4 323 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 PRSS22Q9GZN4 317 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 CCDC90BQ9GZT6 254 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 ING3Q9NXR8 418 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 AK6Q9Y3D8 172 aaKnown RBP6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 V9GY05 133 aa6.54□□□□□ -1.36
HDGFL3-205ENST00000568129 FAM172BPA6NC97 362 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 M0QZK8 103 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 CCRL2O00421 344 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 ITGB1BP1O14713 200 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 YPEL1O60688 119 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 MPIG6BO95866 241 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 HBZP02008 142 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 ARSBP15848 533 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 RCC1P18754 421 aaPredicted RBP6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 CALRP27797 417 aaKnown RBP6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 MNDAP41218 407 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 ARHGDIBP52566 201 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 DIAPH2-AS1Q14236 149 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 HMGN3Q15651 99 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 C2orf76Q3KRA6 126 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 MORN2Q502X0 79 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 CT45A1Q5HYN5 189 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 TREML4Q6UXN2 200 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 Q6ZS46 218 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 TMEM219Q86XT9 240 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 Q8N6K4 173 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 OR4K15Q8NH41 348 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 CT45A3Q8NHU0 189 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 CCDC107Q8WV48 283 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 FAM46BQ96A09 425 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 PTX4Q96A99 478 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 RPEQ96AT9 228 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 YPEL2Q96QA6 119 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 SULT4A1Q9BR01 284 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 NICN1Q9BSH3 213 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 RIMS4Q9H426 269 aaPredicted RBP6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 TRAPPC2LQ9UL33 140 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 SIGLEC9Q9Y336 463 aa6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 RRP15Q9Y3B9 282 aaKnown RBP6.53□□□□□ -1.36
HDGFL3-205ENST00000568129 DNAH3Q8TD57 4116 aa6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 IGHV1-3A0A0C4DH29 117 aa6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 UBE2QL1A1L167 161 aa6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 IFITM5A6NNB3 132 aa6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 M0QZ24 198 aa6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 SDCBPO00560 298 aaPredicted RBP6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 SOCS1O15524 211 aa6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 SPINT2O43291 252 aa6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 FGF16O43320 207 aa6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 GAPDHP04406 335 aaKnown RBP6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 FAM106CPP0CH98 169 aa6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 RAB6AP20340 208 aa6.52□□□□□ -1.37
HDGFL3-205ENST00000568129 CD1BP29016 333 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms