RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 CTF1Q16619 201 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 IDNKQ5T6J7 187 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 GPR107Q5VW38 600 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 ZNF880Q6PDB4 577 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 TRAT1Q6PIZ9 186 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 C5orf24Q7Z6I8 188 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 ANKRD13BQ86YJ7 626 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 OR10A7Q8NGE5 316 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 OR5H6Q8NGV6 325 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 OR10R2Q8NGX6 335 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 OR1L1Q8NH94 360 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 C19orf24Q9BVV8 132 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 CHIAQ9BZP6 476 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 TNFRSF19Q9NS68 423 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 KCNK7Q9Y2U2 307 aa13.94□□□□□ -0.18
COMMD4-220ENST00000567720 IGHV3-43A0A0B4J1X8 118 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 HBZP02008 142 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 IGHV3-43DP0DP04 118 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 GZMHP20718 246 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 GNG10P50151 68 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 LOXL3P58215 753 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 HMGN3Q15651 99 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 HLA-DRB5Q30154 266 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 Q6ZTK2 550 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 GPR141Q7Z602 305 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 PRR18Q8N4B5 295 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 TMEM86BQ8N661 226 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 FAM216AQ8WUB2 273 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 TMEM158Q8WZ71 300 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 RAB3CQ96E17 227 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 TAF9BQ9HBM6 251 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 C12orf4Q9NQ89 552 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 RHBDL2Q9NX52 303 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 GFOD1Q9NXC2 390 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 ETV7Q9Y603 341 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 POMT1Q9Y6A1 747 aa13.93□□□□□ -0.18
COMMD4-220ENST00000567720 TRBV6-6A0A0A6YYG2 114 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 SDCBPO00560 298 aaPredicted RBP13.92□□□□□ -0.18
COMMD4-220ENST00000567720 HIST1H1DP16402 221 aaKnown RBP13.92□□□□□ -0.18
COMMD4-220ENST00000567720 GNB3P16520 340 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 SCAND1P57086 179 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 LRRC75BQ2VPJ9 315 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 PLA1AQ53H76 456 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 MINOS1Q5TGZ0 78 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 MOB1BQ7L9L4 216 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 ZNF554Q86TJ5 538 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 OR9G1Q8NH87 305 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 NDNFQ8TB73 568 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 ZNF596Q8TC21 504 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 SLC25A46Q96AG3 418 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 MEGF9Q9H1U4 602 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 ATG5Q9H1Y0 275 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 MMP28Q9H239 520 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 CHMP1AQ9HD42 196 aaPredicted RBP13.92□□□□□ -0.18
COMMD4-220ENST00000567720 PSG11Q9UQ72 335 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 MINOS1-NBL1R4GNA1 71 aa13.92□□□□□ -0.18
COMMD4-220ENST00000567720 A0A075B6Q4 140 aa13.91□□□□□ -0.18
COMMD4-220ENST00000567720 METTL21EPA6NDL7 271 aa13.91□□□□□ -0.18
COMMD4-220ENST00000567720 H3BUX3 64 aa13.91□□□□□ -0.18
COMMD4-220ENST00000567720 SPINT2O43291 252 aa13.91□□□□□ -0.18
COMMD4-220ENST00000567720 HTR1DP28221 377 aa13.91□□□□□ -0.18
COMMD4-220ENST00000567720 GNMTQ14749 295 aa13.91□□□□□ -0.18
COMMD4-220ENST00000567720 FAM189A2Q15884 450 aa13.91□□□□□ -0.18
COMMD4-220ENST00000567720 SSX2Q16385 188 aa13.91□□□□□ -0.18
COMMD4-220ENST00000567720 OR52M1Q8NGK5 317 aa13.91□□□□□ -0.18
COMMD4-220ENST00000567720 CMSS1Q9BQ75 279 aaKnown RBP13.91□□□□□ -0.18
COMMD4-220ENST00000567720 VPREB3Q9UKI3 123 aa13.91□□□□□ -0.18
COMMD4-220ENST00000567720 A0A1W2PPE3 182 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 J3QR06 171 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 HLA-DRB3P79483 266 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 TMEM30BQ3MIR4 351 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 CROCCP3Q8IVE0 287 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 ZNF439Q8NDP4 499 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 OR10V1Q8NGI7 309 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 SETD6Q8TBK2 473 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 TAF15Q92804 592 aaKnown RBP eCLIP13.9□□□□□ -0.18
COMMD4-220ENST00000567720 MALSU1Q96EH3 234 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 SSX3Q99909 188 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 DPAGT1Q9H3H5 408 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 KCNIP1Q9NZI2 227 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 ELF5Q9UKW6 265 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-220ENST00000567720 SPATA2Q9UM82 520 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 HILPDAQ9Y5L2 63 aa13.9□□□□□ -0.18
COMMD4-220ENST00000567720 VGLL3A8MV65 326 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 BUB1B-PAK6H3BSN5 160 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 TOR1AO14656 332 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 SLC31A2O15432 143 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 TMEM127O75204 238 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 FCGR3AP08637 254 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 ACTG1P63261 375 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 AANATQ16613 207 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 OR5R1Q8NH85 324 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 PIFOQ8TCI5 191 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 RIMS4Q9H426 269 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-220ENST00000567720 Q9N2K0 584 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 RAB9BQ9NP90 201 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.89□□□□□ -0.19
COMMD4-220ENST00000567720 ABRACLQ9P1F3 81 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 DPM3Q9P2X0 92 aa13.89□□□□□ -0.19
COMMD4-220ENST00000567720 GNG12Q9UBI6 72 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms