RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 TMEM11P17152 192 aa11.28□□□□□ -0.6
COMMD4-216ENST00000567023 HES1Q14469 280 aa11.28□□□□□ -0.6
COMMD4-216ENST00000567023 C9orf152Q5JTZ5 239 aa11.28□□□□□ -0.6
COMMD4-216ENST00000567023 ATAD3CQ5T2N8 411 aa11.28□□□□□ -0.6
COMMD4-216ENST00000567023 CNBD2Q96M20 576 aa11.28□□□□□ -0.6
COMMD4-216ENST00000567023 OR14A2Q96R54 314 aa11.28□□□□□ -0.6
COMMD4-216ENST00000567023 AURKAIP1Q9NWT8 199 aaPredicted RBP11.28□□□□□ -0.6
COMMD4-216ENST00000567023 GFOD1Q9NXC2 390 aa11.28□□□□□ -0.6
COMMD4-216ENST00000567023 IGHV1-3A0A0C4DH29 117 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 A0A1W2PPE3 182 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 CCRL2O00421 344 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 SDCBPO00560 298 aaPredicted RBP11.27□□□□□ -0.61
COMMD4-216ENST00000567023 PIN1P1O15428 100 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 RGS10O43665 173 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 DUS4LO95620 317 aaKnown RBP11.27□□□□□ -0.61
COMMD4-216ENST00000567023 IGKV1D-33P01593 117 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 IGKV1-33P01594 117 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 PF4P02776 101 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 CELP19835 753 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 TMEM30BQ3MIR4 351 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 GLIPR1L1Q6UWM5 242 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 PRSS48Q7RTY5 328 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 IZUMO1Q8IYV9 350 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 TMEM104Q8NE00 496 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 CHPT1Q8WUD6 406 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 RCC1LQ96I51 464 aaKnown RBP11.27□□□□□ -0.61
COMMD4-216ENST00000567023 DERL3Q96Q80 235 aa11.27□□□□□ -0.61
COMMD4-216ENST00000567023 MRPS28Q9Y2Q9 187 aaKnown RBP11.27□□□□□ -0.61
COMMD4-216ENST00000567023 A0A1W2PPK0 400 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 FAM90A10PA6NDY2 464 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 FAM90A7PA6NKC0 464 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 FAM90A23PA8MXZ1 464 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 MCRIP1C9JLW8 97 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 AIPO00170 330 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 DENRO43583 198 aaKnown RBP11.26□□□□□ -0.61
COMMD4-216ENST00000567023 CA11O75493 328 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 SC5DO75845 299 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 GLAP06280 429 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 SLC6A1P30531 599 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 ZNF137PP52743 207 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 HNF4GQ14541 408 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 SPHARQ15513 63 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 RBM48Q5RL73 367 aaKnown RBP11.26□□□□□ -0.61
COMMD4-216ENST00000567023 STEAP3Q658P3 488 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 ZNF329Q86UD4 541 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 TGIF2LXQ8IUE1 241 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 JAGN1Q8N5M9 183 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 Q8N6K4 173 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 MRAPQ8TCY5 172 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 CCDC107Q8WV48 283 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 RTN4IP1Q8WWV3 396 aaPredicted RBP11.26□□□□□ -0.61
COMMD4-216ENST00000567023 THRSPQ92748 146 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 MUL1Q969V5 352 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 EAF1Q96JC9 268 aaPredicted RBP11.26□□□□□ -0.61
COMMD4-216ENST00000567023 UQCC2Q9BRT2 126 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 RAB9BQ9NP90 201 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 ZFP57Q9NU63 452 aa11.26□□□□□ -0.61
COMMD4-216ENST00000567023 C12orf77C9JDV5 145 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 CD1BP29016 333 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 GPR50Q13585 617 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 SYT6Q5T7P8 510 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-216ENST00000567023 RAB12Q6IQ22 244 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 SLC25A48Q6ZT89 311 aaKnown RBP11.25□□□□□ -0.61
COMMD4-216ENST00000567023 SLC35E3Q7Z769 313 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 MOB3BQ86TA1 216 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 COMMD1Q8N668 190 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 NKAIN3Q8N8D7 197 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 LINC00482Q8N8I6 264 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 ZNF439Q8NDP4 499 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 OR2T10Q8NGZ9 312 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 NEK7Q8TDX7 302 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 NOL4LQ96MY1 436 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-216ENST00000567023 ABCG5Q9H222 651 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 PLSCR3Q9NRY6 295 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 ETAA1Q9NY74 926 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 GHRLQ9UBU3 117 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 TRAPPC2LQ9UL33 140 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 BLOC1S6Q9UL45 172 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 PEX16Q9Y5Y5 336 aa11.25□□□□□ -0.61
COMMD4-216ENST00000567023 PNMA8CA0A1B0GUJ8 204 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 SERPINE3A8MV23 424 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 SPINT2O43291 252 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 MAS1P04201 325 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 MGMTP16455 207 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 IL3RAP26951 378 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 MAPK3P27361 379 aaPredicted RBP11.24□□□□□ -0.61
COMMD4-216ENST00000567023 REG1BP48304 166 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 ZNF134P52741 427 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 RPL23AP62750 156 aaKnown RBP11.24□□□□□ -0.61
COMMD4-216ENST00000567023 SLC35B1P78383 322 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 KHDC1LQ5JSQ8 128 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 C6orf183Q5T699 404 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 AWAT2Q6E213 333 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 SIGIRRQ6IA17 410 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 FAM53AQ6NSI3 398 aaPredicted RBP11.24□□□□□ -0.61
COMMD4-216ENST00000567023 TRAT1Q6PIZ9 186 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 ZNF554Q86TJ5 538 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 FOXRED2Q8IWF2 684 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 Q8N9W7 124 aa11.24□□□□□ -0.61
COMMD4-216ENST00000567023 UBALD1Q8TB05 177 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms