RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ENSAO43768 121 aaKnown RBP9.96□□□□□ -0.82
CDH1-210ENST00000566612 SULT1A2P50226 295 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 TMEM252Q8N6L7 170 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 ZNF610Q8N9Z0 462 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 GAB2Q9UQC2 676 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 SHANK1Q9Y566 2161 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 LY6G6EA0A0G2JKS1 128 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 RHBDL1O75783 438 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 NQO2P16083 231 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 F2RP25116 425 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 FOXO1Q12778 655 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 TMEM187Q14656 261 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 ZNF818PQ6ZRF7 136 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 MOB1BQ7L9L4 216 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 FAM89BQ8N5H3 189 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 BMPERQ8N8U9 685 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 SCCPDHQ8NBX0 429 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 DLL3Q9NYJ7 618 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 FOXD3Q9UJU5 478 aaPredicted RBP9.95□□□□□ -0.82
CDH1-210ENST00000566612 U3KQA8 63 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 KIAA1549LQ6ZVL6 1849 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 COL6A6A6NMZ7 2263 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 IGKV1-12A0A0C4DH73 117 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 C7orf77A4D0Y5 90 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 OR5H1A6NKK0 313 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 IGKV1D-12P01611 117 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 KITLGP21583 273 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 KCNJ3P48549 501 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 QRFPP83859 136 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 SLC38A11Q08AI6 406 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 NSUN5P2Q63ZY6 315 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 ATP23Q9Y6H3 246 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 FGF7P21781 194 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 CTSSP25774 331 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 UBE2G2P60604 165 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 RPL19P84098 196 aaKnown RBP9.95□□□□□ -0.82
CDH1-210ENST00000566612 USF2Q15853 346 aaPredicted RBP9.95□□□□□ -0.82
CDH1-210ENST00000566612 GGNQ86UU5 652 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 ABHD5Q8WTS1 349 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 SMIM7Q9BQ49 75 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 PARP11Q9NR21 331 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 DECR2Q9NUI1 292 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 OR1A1Q9P1Q5 309 aa9.95□□□□□ -0.82
CDH1-210ENST00000566612 A0A1W2PPH5 198 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 RBFOX3A6NFN3 312 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 CRYBA1P05813 215 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 SEC11BP0C7V7 166 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 PPP1CCP36873 323 aaKnown RBP9.94□□□□□ -0.82
CDH1-210ENST00000566612 CASP6P55212 293 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 ERVS71-1P61550 626 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 COMMD1Q8N668 190 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 EDARADDQ8WWZ3 215 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 MALSU1Q96EH3 234 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 S1PR3Q99500 378 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 RSRP1Q9BUV0 290 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 MTCH1Q9NZJ7 389 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 IGKV1-27A0A075B6S5 117 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 hCG_1809904A0A1W2PP81 198 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 A0A1W2PR64 198 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 A0A1W2PRV1 198 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 PRRG2O14669 202 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 OR2H2O95918 312 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 UCP2P55851 309 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 SUPT4H1P63272 117 aaKnown RBP9.94□□□□□ -0.82
CDH1-210ENST00000566612 LDLRAD3Q86YD5 345 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 OR4A4PQ8NGN8 299 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 MARS2Q96GW9 593 aaKnown RBP9.94□□□□□ -0.82
CDH1-210ENST00000566612 GMPPAQ96IJ6 420 aaPredicted RBP9.94□□□□□ -0.82
CDH1-210ENST00000566612 CYB5BO43169 146 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 NEURL1O76050 574 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 G6PCP35575 357 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 FAM214BQ7L5A3 538 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 Q9N2K0 584 aa9.94□□□□□ -0.82
CDH1-210ENST00000566612 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.94□□□□□ -0.82
CDH1-210ENST00000566612 HEATR1Q9H583 2144 aaKnown RBP9.93□□□□□ -0.82
CDH1-210ENST00000566612 A0A1W2PPE2 198 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 MT-CO2P00403 227 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 OPN1MWP04001 364 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 RD3LP0DJH9 198 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 OPN1MW2P0DN77 364 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 OPN1MW3P0DN78 364 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 HNF1AP20823 631 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 GNG10P50151 68 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 PLGLAQ15195 96 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 SSX3Q99909 188 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 SLC25A22Q9H936 323 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 SERTAD4Q9NUC0 356 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 MT-ND4LP03901 98 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 MDH2P40926 338 aaKnown RBP9.93□□□□□ -0.82
CDH1-210ENST00000566612 RAB13P51153 203 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 ZNF561Q8N587 486 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 CXXC4Q9H2H0 198 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 RNF122Q9H9V4 155 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 ATPIF1Q9UII2 106 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 IGHV3OR15-7A0A075B7D8 119 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 CA11O75493 328 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 PGLYRP1O75594 196 aaPredicted RBP9.93□□□□□ -0.82
CDH1-210ENST00000566612 CRYGSP22914 178 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 HOXA6P31267 233 aa9.93□□□□□ -0.82
CDH1-210ENST00000566612 LHX2P50458 406 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms