RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 RNF212BA8MTL3 300 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 VGLL3A8MV65 326 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 NFYBP25208 207 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 HTR1DP28221 377 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 TGFBR1P36897 503 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 LSM3P62310 102 aaKnown RBP17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 HLA-DRB5Q30154 266 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 ZNF880Q6PDB4 577 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 LHFPL4Q7Z7J7 247 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 OR10R2Q8NGX6 335 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 OR5R1Q8NH85 324 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 RAB3CQ96E17 227 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 PECRQ9BY49 303 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 KCNIP1Q9NZI2 227 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 AK3Q9UIJ7 227 aa17.07■□□□□ 0.32
SHCBP1-205ENST00000566016 IGHV4-59P01825 116 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 SNRPBP14678 240 aaKnown RBP17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 RPS19P39019 145 aaKnown RBP17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 PRRX1P54821 245 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 LOXL3P58215 753 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 RPL15P61313 204 aaKnown RBP17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 ARL6IP1Q15041 203 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 LDLRAD2Q5SZI1 272 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 IDNKQ5T6J7 187 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 GPR141Q7Z602 305 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 C8orf31Q8N9H6 132 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 DUX5Q96PT3 197 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 MDFIQ99750 246 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 C19orf24Q9BVV8 132 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 MGAT4AQ9UM21 535 aa17.06■□□□□ 0.32
SHCBP1-205ENST00000566016 FAM172BPA6NC97 362 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 SERPINE3A8MV23 424 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 MFNGO00587 321 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 TOR1AO14656 332 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 HBZP02008 142 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 NCS1P62166 190 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 CTF1Q16619 201 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 MOGAT2Q3SYC2 334 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 SLC25A46Q96AG3 418 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 MMP28Q9H239 520 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 TAF9BQ9HBM6 251 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 GFOD1Q9NXC2 390 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 ABRACLQ9P1F3 81 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 DPM3Q9P2X0 92 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 KCNK7Q9Y2U2 307 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 BTBD17A6NE02 478 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 J3QR06 171 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 SDCBPO00560 298 aaPredicted RBP17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 HIST1H1DP16402 221 aaKnown RBP17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 CEACAM3P40198 252 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 HMGN3Q15651 99 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 LRRC75BQ2VPJ9 315 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 C16orf87Q6PH81 154 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 NDNFQ8TB73 568 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 CHIAQ9BZP6 476 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 ATG5Q9H1Y0 275 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 RHBDL2Q9NX52 303 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 VPREB3Q9UKI3 123 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 SPATA2Q9UM82 520 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 PSG11Q9UQ72 335 aa17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 AMMECR1Q9Y4X0 333 aaPredicted RBP17.05■□□□□ 0.32
SHCBP1-205ENST00000566016 TENM1Q9UKZ4 2725 aa17.04■□□□□ 0.32
SHCBP1-205ENST00000566016 BUB1B-PAK6H3BSN5 160 aa17.04■□□□□ 0.32
SHCBP1-205ENST00000566016 DYNLT3P51808 116 aa17.04■□□□□ 0.32
SHCBP1-205ENST00000566016 VBP1P61758 197 aa17.04■□□□□ 0.32
SHCBP1-205ENST00000566016 HTD2P86397 168 aa17.04■□□□□ 0.32
SHCBP1-205ENST00000566016 UTF1Q5T230 341 aa17.04■□□□□ 0.32
SHCBP1-205ENST00000566016 Q6ZPA2 131 aa17.04■□□□□ 0.32
SHCBP1-205ENST00000566016 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.04■□□□□ 0.32
SHCBP1-205ENST00000566016 KCTD12Q96CX2 325 aaKnown RBP17.04■□□□□ 0.32
SHCBP1-205ENST00000566016 CMSS1Q9BQ75 279 aaKnown RBP17.04■□□□□ 0.32
SHCBP1-205ENST00000566016 CHMP1AQ9HD42 196 aaPredicted RBP17.04■□□□□ 0.32
SHCBP1-205ENST00000566016 LEUTXA8MZ59 168 aa17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 RPL5P46777 297 aaKnown RBP17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 SERPINB10P48595 397 aa17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 SSX2Q16385 188 aa17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 LTC4SQ16873 150 aa17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 GPR107Q5VW38 600 aa17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 DYNAPQ8N1N2 210 aa17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 LINC00311Q8N616 119 aa17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 OR1L1Q8NH94 360 aa17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 SLC25A38Q96DW6 304 aa17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 SSX3Q99909 188 aa17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 NAA50Q9GZZ1 169 aaKnown RBP17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 JPT1Q9UK76 154 aa17.03■□□□□ 0.32
SHCBP1-205ENST00000566016 A0A0A6YYH2 397 aa17.02■□□□□ 0.32
SHCBP1-205ENST00000566016 A6NJ64 397 aa17.02■□□□□ 0.32
SHCBP1-205ENST00000566016 OOSP1A8MZH6 123 aa17.02■□□□□ 0.32
SHCBP1-205ENST00000566016 LY6LH3BQJ8 138 aa17.02■□□□□ 0.32
SHCBP1-205ENST00000566016 STEAP3Q658P3 488 aa17.02■□□□□ 0.32
SHCBP1-205ENST00000566016 OLFML2AQ68BL7 652 aa17.02■□□□□ 0.32
SHCBP1-205ENST00000566016 PRR18Q8N4B5 295 aa17.02■□□□□ 0.32
SHCBP1-205ENST00000566016 UBALD1Q8TB05 177 aa17.02■□□□□ 0.32
SHCBP1-205ENST00000566016 GALMQ96C23 342 aa17.02■□□□□ 0.32
SHCBP1-205ENST00000566016 HDHD3Q9BSH5 251 aaPredicted RBP17.02■□□□□ 0.32
SHCBP1-205ENST00000566016 GNG12Q9UBI6 72 aa17.02■□□□□ 0.32
SHCBP1-205ENST00000566016 H3BUX3 64 aa17.01■□□□□ 0.31
SHCBP1-205ENST00000566016 CD3GP09693 182 aa17.01■□□□□ 0.31
SHCBP1-205ENST00000566016 GNB3P16520 340 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms