RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 CCDC144NLQ6NUI1 221 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 CCBE1Q6UXH8 406 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-212ENST00000565517 C8orf31Q8N9H6 132 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 OR4K15Q8NH41 348 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 SGMS2Q8NHU3 365 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 FAM3DQ96BQ1 224 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 LPAR5Q9H1C0 372 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 KCNK15Q9H427 330 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 STEAP1Q9UHE8 339 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 STUB1Q9UNE7 303 aa12.42□□□□□ -0.42
COMMD4-212ENST00000565517 SHISA3A0PJX4 238 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 C12orf77C9JDV5 145 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 SDCBPO00560 298 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-212ENST00000565517 LDLRAD4O15165 306 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 RAB3BP20337 219 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 PROK1P58294 105 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 LTC4SQ16873 150 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 NKAPLQ5M9Q1 402 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 C22orf42Q6IC83 251 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 LINC00311Q8N616 119 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 OR51D1Q8NGF3 324 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 WFDC12Q8WWY7 111 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 SULT4A1Q9BR01 284 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 NICN1Q9BSH3 213 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 FAAP24Q9BTP7 215 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 NPFFR1Q9GZQ6 430 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 PLEKHJ1Q9NW61 149 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 TXNL4BQ9NX01 149 aaKnown RBP12.41□□□□□ -0.42
COMMD4-212ENST00000565517 GFOD1Q9NXC2 390 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 HSF4Q9ULV5 492 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 SSR3Q9UNL2 185 aa12.41□□□□□ -0.42
COMMD4-212ENST00000565517 A0A0A6YYD4 124 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 IFITM5A6NNB3 132 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 CHST1O43916 411 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 HBZP02008 142 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 RCC1P18754 421 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-212ENST00000565517 MNDAP41218 407 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 CLDN12P56749 244 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 MADCAM1Q13477 382 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 C11orf88Q6PI97 169 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 C16orf82Q7Z2V1 217 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 C6orf201Q7Z4U5 140 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 TPRA1Q86W33 373 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 OR4C13Q8NGP0 309 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 MRPL30Q8TCC3 161 aaKnown RBP12.4□□□□□ -0.42
COMMD4-212ENST00000565517 LEAP2Q969E1 77 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 RPEQ96AT9 228 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 RIMS4Q9H426 269 aaPredicted RBP12.4□□□□□ -0.42
COMMD4-212ENST00000565517 TAF9BQ9HBM6 251 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 KCNIP1Q9NZI2 227 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 RAB22AQ9UL26 194 aa12.4□□□□□ -0.42
COMMD4-212ENST00000565517 FOXI3A8MTJ6 420 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-212ENST00000565517 SOCS1O15524 211 aa12.39□□□□□ -0.43
COMMD4-212ENST00000565517 TNFAIP8O95379 198 aa12.39□□□□□ -0.43
COMMD4-212ENST00000565517 IGHV3-7P01780 117 aa12.39□□□□□ -0.43
COMMD4-212ENST00000565517 JUNBP17275 347 aaPredicted RBP12.39□□□□□ -0.43
COMMD4-212ENST00000565517 GNG10P50151 68 aa12.39□□□□□ -0.43
COMMD4-212ENST00000565517 RAB7AP51149 207 aa12.39□□□□□ -0.43
COMMD4-212ENST00000565517 OR10A3P58181 314 aa12.39□□□□□ -0.43
COMMD4-212ENST00000565517 HES5Q5TA89 166 aa12.39□□□□□ -0.43
COMMD4-212ENST00000565517 STEAP3Q658P3 488 aa12.39□□□□□ -0.43
COMMD4-212ENST00000565517 OR10X1Q8NGY0 326 aa12.39□□□□□ -0.43
COMMD4-212ENST00000565517 TOMM40LQ969M1 308 aa12.39□□□□□ -0.43
COMMD4-212ENST00000565517 OCSTAMPQ9BR26 566 aa12.39□□□□□ -0.43
COMMD4-212ENST00000565517 A0A087WXM4 84 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 TRBV6-6A0A0A6YYG2 114 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 TMEM272A0A1B0GTI8 110 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 FAM90A9PA6NNJ1 464 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 NAPSAO96009 420 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 TMEM50BP56557 158 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 HTD2P86397 168 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 NEDD8Q15843 81 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 ZNF880Q6PDB4 577 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 Q6ZTK2 550 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 TMEM219Q86XT9 240 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 THNSL2Q86YJ6 484 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 OR8H3Q8N146 312 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 Q8N2B8 174 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 OR56B1Q8NGI3 324 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 OR1L1Q8NH94 360 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 OR2T6Q8NHC8 308 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 UBALD1Q8TB05 177 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 PTX4Q96A99 478 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 CYYR1Q96J86 154 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 CITED1Q99966 193 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 GNG12Q9UBI6 72 aa12.38□□□□□ -0.43
COMMD4-212ENST00000565517 NOTOA8MTQ0 251 aa12.37□□□□□ -0.43
COMMD4-212ENST00000565517 RRP9O43818 475 aaKnown RBP12.37□□□□□ -0.43
COMMD4-212ENST00000565517 RAB6AP20340 208 aa12.37□□□□□ -0.43
COMMD4-212ENST00000565517 VEGFCP49767 419 aa12.37□□□□□ -0.43
COMMD4-212ENST00000565517 EFNB2P52799 333 aa12.37□□□□□ -0.43
COMMD4-212ENST00000565517 ZNF816Q0VGE8 651 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-212ENST00000565517 HMGN3Q15651 99 aa12.37□□□□□ -0.43
COMMD4-212ENST00000565517 LY6G6FQ5SQ64 297 aa12.37□□□□□ -0.43
COMMD4-212ENST00000565517 SLC25A48Q6ZT89 311 aaKnown RBP12.37□□□□□ -0.43
COMMD4-212ENST00000565517 NR2C2APQ86WQ0 139 aa12.37□□□□□ -0.43
COMMD4-212ENST00000565517 PRR18Q8N4B5 295 aa12.37□□□□□ -0.43
COMMD4-212ENST00000565517 ZNF439Q8NDP4 499 aa12.37□□□□□ -0.43
COMMD4-212ENST00000565517 TSPAN14Q8NG11 270 aa12.37□□□□□ -0.43
COMMD4-212ENST00000565517 GALMQ96C23 342 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms