RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 LCNL1Q6ZST4 164 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 SLC35E3Q7Z769 313 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 JAGN1Q8N5M9 183 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 Q8N9W7 124 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 OR10V1Q8NGI7 309 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 OR4K15Q8NH41 348 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 OR1L1Q8NH94 360 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 CHPT1Q8WUD6 406 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 RTN4IP1Q8WWV3 396 aaPredicted RBP18.7■□□□□ 0.58
RAB40C-209ENST00000565511 DERL3Q96Q80 235 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 PLSCR3Q9NRY6 295 aa18.7■□□□□ 0.58
RAB40C-209ENST00000565511 ORC5O43913 435 aa18.69■□□□□ 0.58
RAB40C-209ENST00000565511 TTC23Q5W5X9 447 aa18.69■□□□□ 0.58
RAB40C-209ENST00000565511 SIGIRRQ6IA17 410 aa18.69■□□□□ 0.58
RAB40C-209ENST00000565511 STPG2Q8N412 459 aa18.69■□□□□ 0.58
RAB40C-209ENST00000565511 C8orf31Q8N9H6 132 aa18.69■□□□□ 0.58
RAB40C-209ENST00000565511 DUX3Q96PT4 197 aa18.69■□□□□ 0.58
RAB40C-209ENST00000565511 PAK1IP1Q9NWT1 392 aaPredicted RBP18.69■□□□□ 0.58
RAB40C-209ENST00000565511 ZNF780AO75290 641 aaPredicted RBP18.68■□□□□ 0.58
RAB40C-209ENST00000565511 MAS1P04201 325 aa18.68■□□□□ 0.58
RAB40C-209ENST00000565511 GPR12P47775 334 aa18.68■□□□□ 0.58
RAB40C-209ENST00000565511 EGFEM1PQ0D2K5 195 aa18.68■□□□□ 0.58
RAB40C-209ENST00000565511 SYT6Q5T7P8 510 aaPredicted RBP18.68■□□□□ 0.58
RAB40C-209ENST00000565511 RAB12Q6IQ22 244 aa18.68■□□□□ 0.58
RAB40C-209ENST00000565511 GAPTQ8N292 157 aa18.68■□□□□ 0.58
RAB40C-209ENST00000565511 DHRSXQ8N5I4 330 aa18.68■□□□□ 0.58
RAB40C-209ENST00000565511 ETAA1Q9NY74 926 aa18.68■□□□□ 0.58
RAB40C-209ENST00000565511 HBZP02008 142 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 RCC1P18754 421 aaPredicted RBP18.67■□□□□ 0.58
RAB40C-209ENST00000565511 INSL4Q14641 139 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 RCN1Q15293 331 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 CT45A1Q5HYN5 189 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 AWAT2Q6E213 333 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 SLC25A48Q6ZT89 311 aaKnown RBP18.67■□□□□ 0.58
RAB40C-209ENST00000565511 TGIF2LXQ8IUE1 241 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 SETD9Q8NE22 299 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 KLHL30-AS1Q8NEE0 82 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 CT45A3Q8NHU0 189 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 P2RX4Q99571 388 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 HSPB9Q9BQS6 159 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 CKLFQ9UBR5 152 aa18.67■□□□□ 0.58
RAB40C-209ENST00000565511 NCBP2LA6PVI3 153 aaKnown RBP18.66■□□□□ 0.58
RAB40C-209ENST00000565511 GNMTQ14749 295 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 C11orf87Q6NUJ2 197 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 AHSA2Q719I0 299 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 PRR18Q8N4B5 295 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 PACRGLQ8N7B6 248 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 OR2T10Q8NGZ9 312 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 FBLIM1Q8WUP2 373 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 Q96M66 194 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 SELENOIQ9C0D9 397 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 ABCG5Q9H222 651 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 CHCHD3Q9NX63 227 aaKnown RBP18.66■□□□□ 0.58
RAB40C-209ENST00000565511 PSORS1C1Q9UIG5 152 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 TRAPPC2LQ9UL33 140 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 PEX16Q9Y5Y5 336 aa18.66■□□□□ 0.58
RAB40C-209ENST00000565511 NUDT19A8MXV4 375 aa18.65■□□□□ 0.58
RAB40C-209ENST00000565511 RPLP1P05386 114 aaKnown RBP18.65■□□□□ 0.58
RAB40C-209ENST00000565511 MGMTP16455 207 aa18.65■□□□□ 0.58
RAB40C-209ENST00000565511 ZNF137PP52743 207 aa18.65■□□□□ 0.58
RAB40C-209ENST00000565511 F2RL1P55085 397 aa18.65■□□□□ 0.58
RAB40C-209ENST00000565511 GP2P55259 537 aaKnown RBP18.65■□□□□ 0.58
RAB40C-209ENST00000565511 STX19Q8N4C7 294 aa18.65■□□□□ 0.58
RAB40C-209ENST00000565511 RAX2Q96IS3 184 aa18.65■□□□□ 0.58
RAB40C-209ENST00000565511 LIN7CQ9NUP9 197 aaKnown RBP18.65■□□□□ 0.58
RAB40C-209ENST00000565511 UBE2QL1A1L167 161 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 EFCAB10A6NFE3 127 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 MCRIP1C9JLW8 97 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 SC5DO75845 299 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 CELP19835 753 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 CD1BP29016 333 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 CAPGP40121 348 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 GPR176Q14439 515 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 DEFB136Q30KP8 78 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 FAM27D1Q5T7N8 215 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 FOXRED2Q8IWF2 684 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 OR51D1Q8NGF3 324 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 FAM46BQ96A09 425 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 S1PR3Q99500 378 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 SPACA1Q9HBV2 294 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 CNOT2Q9NZN8 540 aaKnown RBP18.64■□□□□ 0.57
RAB40C-209ENST00000565511 GNG12Q9UBI6 72 aa18.64■□□□□ 0.57
RAB40C-209ENST00000565511 CRTAPO75718 401 aaPredicted RBP18.63■□□□□ 0.57
RAB40C-209ENST00000565511 DUS4LO95620 317 aaKnown RBP18.63■□□□□ 0.57
RAB40C-209ENST00000565511 MOSP00540 346 aa18.63■□□□□ 0.57
RAB40C-209ENST00000565511 TAS2R43P59537 309 aa18.63■□□□□ 0.57
RAB40C-209ENST00000565511 CFHR3Q02985 330 aa18.63■□□□□ 0.57
RAB40C-209ENST00000565511 MED21Q13503 144 aa18.63■□□□□ 0.57
RAB40C-209ENST00000565511 Q3ZCU0 254 aa18.63■□□□□ 0.57
RAB40C-209ENST00000565511 FAM71E2Q8N5Q1 922 aa18.63■□□□□ 0.57
RAB40C-209ENST00000565511 MRPL30Q8TCC3 161 aaKnown RBP18.63■□□□□ 0.57
RAB40C-209ENST00000565511 TFAP2CQ92754 450 aa18.63■□□□□ 0.57
RAB40C-209ENST00000565511 KCNK15Q9H427 330 aa18.63■□□□□ 0.57
RAB40C-209ENST00000565511 ZFP57Q9NU63 452 aa18.63■□□□□ 0.57
RAB40C-209ENST00000565511 FKBP14Q9NWM8 211 aa18.63■□□□□ 0.57
RAB40C-209ENST00000565511 KMT2CQ8NEZ4 4911 aaKnown RBP18.62■□□□□ 0.57
RAB40C-209ENST00000565511 AP4M1O00189 453 aa18.62■□□□□ 0.57
RAB40C-209ENST00000565511 SPINT2O43291 252 aa18.62■□□□□ 0.57
RAB40C-209ENST00000565511 IL3RAP26951 378 aa18.62■□□□□ 0.57
RAB40C-209ENST00000565511 MYCNOSP40205 109 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms