RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 DOCK11Q5JSL3 2073 aa5.08□□□□□ -1.6
TCF4-228ENST00000565393 MAGEA13PA6NCF6 341 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 ZNF736B4DX44 427 aaPredicted RBP5.07□□□□□ -1.6
TCF4-228ENST00000565393 MYL12BO14950 172 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 FGF16O43320 207 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 MOSP00540 346 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 IGHG2P01859 326 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 HBZP02008 142 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 MGMTP16455 207 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 RCC1P18754 421 aaPredicted RBP5.07□□□□□ -1.6
TCF4-228ENST00000565393 FUT3P21217 361 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 CD1BP29016 333 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 MYCNOSP40205 109 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 VHLP40337 213 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 ZNF134P52741 427 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 WNT4P56705 351 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 RPS11P62280 158 aaKnown RBP eCLIP5.07□□□□□ -1.6
TCF4-228ENST00000565393 PAX5Q02548 391 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 ZNF816Q0VGE8 651 aaPredicted RBP5.07□□□□□ -1.6
TCF4-228ENST00000565393 DOC2BQ14184 412 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 EBI3Q14213 229 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 RCN1Q15293 331 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 ACSM3Q53FZ2 586 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 CT45A1Q5HYN5 189 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 C6orf183Q5T699 404 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 TEX38Q6PEX7 206 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 SLC25A48Q6ZT89 311 aaKnown RBP5.07□□□□□ -1.6
TCF4-228ENST00000565393 C18orf65Q6ZTR6 163 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 C8orf86Q6ZUL3 223 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 AHSA2Q719I0 299 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 OR2W3Q7Z3T1 314 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 TGIF2LXQ8IUE1 241 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 ZNF695Q8IW36 515 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 MRPL41Q8IXM3 137 aaKnown RBP5.07□□□□□ -1.6
TCF4-228ENST00000565393 STPG2Q8N412 459 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 COMMD1Q8N668 190 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 NANOGP1Q8N7R0 232 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 KLHL30-AS1Q8NEE0 82 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 OR52L2PQ8NGH6 319 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 OR1L1Q8NH94 360 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 CT45A3Q8NHU0 189 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 RTN4IP1Q8WWV3 396 aaPredicted RBP5.07□□□□□ -1.6
TCF4-228ENST00000565393 TFAP2CQ92754 450 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 DPF1Q92782 380 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 FAM46BQ96A09 425 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 NEDD4LQ96PU5 975 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 ABCG5Q9H222 651 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 TAF9BQ9HBM6 251 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 OR2S2Q9NQN1 319 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 PSORS1C1Q9UIG5 152 aa5.07□□□□□ -1.6
TCF4-228ENST00000565393 TRBV5-7A0A0A0MS05 114 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 C12orf77C9JDV5 145 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 H0YHG0 523 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 CCL24O00175 119 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 AP4M1O00189 453 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 SLC31A2O15432 143 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 RPLP1P05386 114 aaKnown RBP5.06□□□□□ -1.6
TCF4-228ENST00000565393 GLAP06280 429 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 VDAC1P21796 283 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 MAPK3P27361 379 aaPredicted RBP5.06□□□□□ -1.6
TCF4-228ENST00000565393 SOX6P35712 828 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 GPR12P47775 334 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 THBS3P49746 956 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 F2RL1P55085 397 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 KRTAP10-11P60412 298 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 RPL23AP62750 156 aaKnown RBP5.06□□□□□ -1.6
TCF4-228ENST00000565393 GABPB1Q06547 395 aaPredicted RBP5.06□□□□□ -1.6
TCF4-228ENST00000565393 GPR50Q13585 617 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 Q3ZCU0 254 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 MORN2Q502X0 79 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 CXorf66Q5JRM2 361 aaPredicted RBP5.06□□□□□ -1.6
TCF4-228ENST00000565393 NKAPLQ5M9Q1 402 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 STEAP3Q658P3 488 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 GLT8D1Q68CQ7 371 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 TMEM65Q6PI78 240 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 TRAT1Q6PIZ9 186 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 LCNL1Q6ZST4 164 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 CEACAM19Q7Z692 300 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 C5orf24Q7Z6I8 188 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 LINC00311Q8N616 119 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 LINC00482Q8N8I6 264 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 C8orf31Q8N9H6 132 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 Q8N9W7 124 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 ZNF485Q8NCK3 441 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 TMEM104Q8NE00 496 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 OR8H1Q8NGG4 311 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 SETD6Q8TBK2 473 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 ST6GALNAC6Q969X2 333 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 GALMQ96C23 342 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 RBMXL1Q96E39 390 aaKnown RBP5.06□□□□□ -1.6
TCF4-228ENST00000565393 PGLYRP3Q96LB9 341 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 DUX3Q96PT4 197 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 DERL3Q96Q80 235 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 S1PR3Q99500 378 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 FAAP24Q9BTP7 215 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 MCRIP2Q9BUT9 160 aaKnown RBP5.06□□□□□ -1.6
TCF4-228ENST00000565393 TMED9Q9BVK6 235 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 GPR61Q9BZJ8 451 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 VCXQ9H320 206 aa5.06□□□□□ -1.6
TCF4-228ENST00000565393 DCLRE1BQ9H816 532 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms