RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 LIN7CQ9NUP9 197 aaKnown RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 GFOD1Q9NXC2 390 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 ING4Q9UNL4 249 aa6.73□□□□□ -1.33
CAPN3-213ENST00000565173 RPL36Q9Y3U8 105 aaKnown RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 LSM4Q9Y4Z0 139 aaKnown RBP6.73□□□□□ -1.33
CAPN3-213ENST00000565173 IGHV3-43A0A0B4J1X8 118 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 TMEM30CPA0ZSE6 113 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 MAGEA13PA6NCF6 341 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 NCBP2LA6PVI3 153 aaKnown RBP6.72□□□□□ -1.33
CAPN3-213ENST00000565173 AP4M1O00189 453 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 SDCBPO00560 298 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-213ENST00000565173 SLC31A2O15432 143 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 GPX5O75715 221 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 LALBAP00709 142 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 IGHV3-43DP0DP04 118 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 CD1BP29016 333 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 ZNF137PP52743 207 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 F2RL1P55085 397 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 RPS11P62280 158 aaKnown RBP eCLIP6.72□□□□□ -1.33
CAPN3-213ENST00000565173 DGCR2P98153 550 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 FOXE3Q13461 319 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 KIR2DS1Q14954 304 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 MPV17LQ2QL34 196 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 DEFB136Q30KP8 78 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 Q3ZCU0 254 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 DDI2Q5TDH0 399 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 OR2G6Q5TZ20 316 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 LINC00596Q86U02 117 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 GAPTQ8N292 157 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 FAM71E2Q8N5Q1 922 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 ZNF439Q8NDP4 499 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 OR2T10Q8NGZ9 312 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 TFAP2CQ92754 450 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 CYYR1Q96J86 154 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 WWC2-AS2Q96NR7 200 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 S1PR3Q99500 378 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 HSPB9Q9BQS6 159 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 VCX3BQ9H321 246 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 BABAM2Q9NXR7 383 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 SCOCQ9UIL1 159 aa6.72□□□□□ -1.33
CAPN3-213ENST00000565173 SACSQ9NZJ4 4579 aa6.71□□□□□ -1.33
CAPN3-213ENST00000565173 TRAV8-7A0A075B6U6 113 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 TRBV5-5A0A0J9YX44 114 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 C12orf77C9JDV5 145 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 RAMP3O60896 148 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 MOSP00540 346 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 IGHG4P01861 327 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 CSTBP04080 98 aaKnown RBP6.71□□□□□ -1.34
CAPN3-213ENST00000565173 CD2P06729 351 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 ELANEP08246 267 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 SERPINA2P20848 420 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 DCKP27707 260 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 BDKRB2P30411 391 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 CAPGP40121 348 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 LUMP51884 338 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-213ENST00000565173 AQP4P55087 323 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 ADARB1P78563 741 aaKnown RBP6.71□□□□□ -1.34
CAPN3-213ENST00000565173 GPR50Q13585 617 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 KIAA0141Q14154 515 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-213ENST00000565173 SLC22A6Q4U2R8 563 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 CT45A1Q5HYN5 189 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 NKAPLQ5M9Q1 402 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 ATAD3CQ5T2N8 411 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 DMKNQ6E0U4 476 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-213ENST00000565173 UNQ9370/PRO34162Q6UXP9 181 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 SLC25A48Q6ZT89 311 aaKnown RBP6.71□□□□□ -1.34
CAPN3-213ENST00000565173 LYPD6Q86Y78 171 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF485Q8NCK3 441 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 SETD9Q8NE22 299 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 OR13C5Q8NGS8 318 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 CT45A3Q8NHU0 189 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 GHSRQ92847 366 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 SMIM19Q96E16 107 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF184Q99676 751 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-213ENST00000565173 GON7Q9BXV9 100 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 PAK1IP1Q9NWT1 392 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-213ENST00000565173 RCC2Q9P258 522 aaKnown RBP6.71□□□□□ -1.34
CAPN3-213ENST00000565173 CLEC2DQ9UHP7 191 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 STAB2Q8WWQ8 2551 aa6.71□□□□□ -1.34
CAPN3-213ENST00000565173 AIPO00170 330 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 ZNF780AO75290 641 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-213ENST00000565173 SC5DO75845 299 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 HBZP02008 142 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 IGF1P05019 195 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 NHLRC4P0CG21 123 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-213ENST00000565173 GTF2F2P13984 249 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 PSMB8P28062 276 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 GP2P55259 537 aaKnown RBP6.7□□□□□ -1.34
CAPN3-213ENST00000565173 PPP3R1P63098 170 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 FHL3Q13643 280 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 CXorf66Q5JRM2 361 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-213ENST00000565173 SYT6Q5T7P8 510 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-213ENST00000565173 STEAP3Q658P3 488 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 IZUMO2Q6UXV1 221 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 TMPRSS11AQ6ZMR5 421 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 C8orf59Q8N0T1 100 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-213ENST00000565173 OR8H1Q8NGG4 311 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 OR8U1Q8NH10 309 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 OR1L1Q8NH94 360 aa6.7□□□□□ -1.34
CAPN3-213ENST00000565173 MYOZ3Q8TDC0 251 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms