RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 UTF1Q5T230 341 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 OLFML2AQ68BL7 652 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 SHISA2Q6UWI4 295 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 Q6ZSV7 163 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 PRR18Q8N4B5 295 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 OR51D1Q8NGF3 324 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 PIFOQ8TCI5 191 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 RPEQ96AT9 228 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 FAM3DQ96BQ1 224 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 SULT4A1Q9BR01 284 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 NICN1Q9BSH3 213 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 FAAP24Q9BTP7 215 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 MMP28Q9H239 520 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 PLEKHJ1Q9NW61 149 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 KCNIP1Q9NZI2 227 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 STEAP1Q9UHE8 339 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 PITPNC1Q9UKF7 332 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 STUB1Q9UNE7 303 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 PSG11Q9UQ72 335 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 TCF19Q9Y242 345 aa8.02□□□□□ -1.13
CDH1-206ENST00000564676 AMMECR1Q9Y4X0 333 aaPredicted RBP8.02□□□□□ -1.13
CDH1-206ENST00000564676 IGHV3-43A0A0B4J1X8 118 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 A0A1W2PPE3 182 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 SHISA3A0PJX4 238 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 C12orf77C9JDV5 145 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 SDCBPO00560 298 aaPredicted RBP8.01□□□□□ -1.13
CDH1-206ENST00000564676 RRP9O43818 475 aaKnown RBP8.01□□□□□ -1.13
CDH1-206ENST00000564676 IGHV3-43DP0DP04 118 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 RAB3BP20337 219 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 FGF9P31371 208 aaPredicted RBP8.01□□□□□ -1.13
CDH1-206ENST00000564676 BRS3P32247 399 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 MNDAP41218 407 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 DYNLT3P51808 116 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 TPTE2P1Q5T6R2 138 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 CCDC144NLQ6NUI1 221 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 TRAT1Q6PIZ9 186 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 SLC16A12Q6ZSM3 486 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 C6orf201Q7Z4U5 140 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 TMEM219Q86XT9 240 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 OR52M1Q8NGK5 317 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 OR10X1Q8NGY0 326 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 LINC01006Q8NI28 216 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 CYYR1Q96J86 154 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 NPFFR1Q9GZQ6 430 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 LPAR5Q9H1C0 372 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 CHMP1AQ9HD42 196 aaPredicted RBP8.01□□□□□ -1.13
CDH1-206ENST00000564676 VCX3AQ9NNX9 186 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 TXNL4BQ9NX01 149 aaKnown RBP8.01□□□□□ -1.13
CDH1-206ENST00000564676 GFOD1Q9NXC2 390 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 GNG12Q9UBI6 72 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 RAB22AQ9UL26 194 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 RNF114Q9Y508 228 aa8.01□□□□□ -1.13
CDH1-206ENST00000564676 A0A087WXM4 84 aa8□□□□□ -1.13
CDH1-206ENST00000564676 A0A0A6YYD4 124 aa8□□□□□ -1.13
CDH1-206ENST00000564676 TMEM272A0A1B0GTI8 110 aa8□□□□□ -1.13
CDH1-206ENST00000564676 SMIM30A4D0T7 59 aa8□□□□□ -1.13
CDH1-206ENST00000564676 A6NDX4 124 aa8□□□□□ -1.13
CDH1-206ENST00000564676 IFITM5A6NNB3 132 aa8□□□□□ -1.13
CDH1-206ENST00000564676 OOSP1A8MZH6 123 aa8□□□□□ -1.13
CDH1-206ENST00000564676 SOCS1O15524 211 aa8□□□□□ -1.13
CDH1-206ENST00000564676 TSPAN9O75954 239 aa8□□□□□ -1.13
CDH1-206ENST00000564676 TNFAIP8O95379 198 aa8□□□□□ -1.13
CDH1-206ENST00000564676 HBZP02008 142 aa8□□□□□ -1.13
CDH1-206ENST00000564676 CD36P16671 472 aa8□□□□□ -1.13
CDH1-206ENST00000564676 RCC1P18754 421 aaPredicted RBP8□□□□□ -1.13
CDH1-206ENST00000564676 VEGFCP49767 419 aa8□□□□□ -1.13
CDH1-206ENST00000564676 MADCAM1Q13477 382 aa8□□□□□ -1.13
CDH1-206ENST00000564676 CCBE1Q6UXH8 406 aaPredicted RBP8□□□□□ -1.13
CDH1-206ENST00000564676 GAPTQ8N292 157 aa8□□□□□ -1.13
CDH1-206ENST00000564676 FAM89BQ8N5H3 189 aa8□□□□□ -1.13
CDH1-206ENST00000564676 DTX3Q8N9I9 347 aa8□□□□□ -1.13
CDH1-206ENST00000564676 TSPAN14Q8NG11 270 aa8□□□□□ -1.13
CDH1-206ENST00000564676 OR4C13Q8NGP0 309 aa8□□□□□ -1.13
CDH1-206ENST00000564676 OR1L1Q8NH94 360 aa8□□□□□ -1.13
CDH1-206ENST00000564676 SETD6Q8TBK2 473 aa8□□□□□ -1.13
CDH1-206ENST00000564676 MRPL30Q8TCC3 161 aaKnown RBP8□□□□□ -1.13
CDH1-206ENST00000564676 CAPSLQ8WWF8 208 aa8□□□□□ -1.13
CDH1-206ENST00000564676 TOMM40LQ969M1 308 aa8□□□□□ -1.13
CDH1-206ENST00000564676 CHCHD6Q9BRQ6 235 aa8□□□□□ -1.13
CDH1-206ENST00000564676 OR51E2Q9H255 320 aa8□□□□□ -1.13
CDH1-206ENST00000564676 C16orf95Q9H693 158 aa8□□□□□ -1.13
CDH1-206ENST00000564676 TAF9BQ9HBM6 251 aa8□□□□□ -1.13
CDH1-206ENST00000564676 FBLN5Q9UBX5 448 aa8□□□□□ -1.13
CDH1-206ENST00000564676 LOC100506127A0A0U1RQW1 187 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 LY6LH3BQJ8 138 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 LDLRAD4O15165 306 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 CHST1O43916 411 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 GADD45AP24522 165 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 CD24P25063 80 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 IL3RAP26951 378 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 KIR2DS4P43632 304 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 LOXL3P58215 753 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 TMEM30BQ3MIR4 351 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 FAM53AQ6NSI3 398 aaPredicted RBP7.99□□□□□ -1.13
CDH1-206ENST00000564676 Q6ZTK2 550 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 ZNF554Q86TJ5 538 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 OR56B1Q8NGI3 324 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 OR10V1Q8NGI7 309 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 WFDC12Q8WWY7 111 aa7.99□□□□□ -1.13
CDH1-206ENST00000564676 ARHGAP5-AS1Q96IT6 56 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms