RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 V9GY05 133 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 TRAV1-2A0A0B4J238 106 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 TRAV39A0A0B4J263 110 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 TRDV1A0A1B0GX56 115 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 UBE2QL1A1L167 161 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 TMEM14DPA8MWL7 114 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 C15orf65H3BRN8 121 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 SDCBPO00560 298 aaPredicted RBP10.78□□□□□ -0.68
CLK3-216ENST00000564468 IL3RAP26951 378 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 PSMB9P28065 219 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 RAB7AP51149 207 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 MADCAM1Q13477 382 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 NKAPLQ5M9Q1 402 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 SIGIRRQ6IA17 410 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 CD200R1LQ6Q8B3 271 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 C8orf31Q8N9H6 132 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 OR10X1Q8NGY0 326 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 OR4K15Q8NH41 348 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 TOMM40LQ969M1 308 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 PRSS22Q9GZN4 317 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 GFOD1Q9NXC2 390 aa10.78□□□□□ -0.68
CLK3-216ENST00000564468 TET2Q6N021 2002 aaPredicted RBP10.78□□□□□ -0.68
CLK3-216ENST00000564468 LY6LH3BQJ8 138 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 TIMM23O14925 209 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 LPLP06858 475 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 CHATP28329 748 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 BLVRBP30043 206 aaPredicted RBP10.77□□□□□ -0.69
CLK3-216ENST00000564468 GNG10P50151 68 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 QRFPP83859 136 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 OR10K2Q6IF99 312 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 ZNF773Q6PK81 442 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 CCBE1Q6UXH8 406 aaPredicted RBP10.77□□□□□ -0.69
CLK3-216ENST00000564468 OR8H3Q8N146 312 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 LINC00311Q8N616 119 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 CITED1Q99966 193 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 RIMS4Q9H426 269 aaPredicted RBP10.77□□□□□ -0.69
CLK3-216ENST00000564468 MBNL3Q9NUK0 354 aaKnown RBP10.77□□□□□ -0.69
CLK3-216ENST00000564468 PLEKHJ1Q9NW61 149 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 STEAP1Q9UHE8 339 aa10.77□□□□□ -0.69
CLK3-216ENST00000564468 C12orf77C9JDV5 145 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 CHST1O43916 411 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 IGHV3-7P01780 117 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 HBZP02008 142 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 FAM106CPP0CH98 169 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 DEFA6Q01524 100 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 UNC119Q13432 240 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 P2RY14Q15391 338 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 ARSJQ5FYB0 599 aaPredicted RBP10.76□□□□□ -0.69
CLK3-216ENST00000564468 TMEM219Q86XT9 240 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 THNSL2Q86YJ6 484 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 OR51D1Q8NGF3 324 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 LEAP2Q969E1 77 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 FAM3DQ96BQ1 224 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 GFI1Q99684 422 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 OCSTAMPQ9BR26 566 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 LIN7BQ9HAP6 207 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 GNG12Q9UBI6 72 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 TRRAPQ9Y4A5 3859 aa10.76□□□□□ -0.69
CLK3-216ENST00000564468 M0QZ24 198 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 M0QZK8 103 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 GAPDHP04406 335 aaKnown RBP10.75□□□□□ -0.69
CLK3-216ENST00000564468 RCC1P18754 421 aaPredicted RBP10.75□□□□□ -0.69
CLK3-216ENST00000564468 RAB3BP20337 219 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 FGF9P31371 208 aaPredicted RBP10.75□□□□□ -0.69
CLK3-216ENST00000564468 EFNB2P52799 333 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 LOXL3P58215 753 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 C2orf76Q3KRA6 126 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 KCTD21Q4G0X4 260 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 STEAP3Q658P3 488 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 C6orf201Q7Z4U5 140 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 PRR18Q8N4B5 295 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 FAM89BQ8N5H3 189 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 OR56B1Q8NGI3 324 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 MRPL30Q8TCC3 161 aaKnown RBP10.75□□□□□ -0.69
CLK3-216ENST00000564468 SULT4A1Q9BR01 284 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 NICN1Q9BSH3 213 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 FAAP24Q9BTP7 215 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 LPAR5Q9H1C0 372 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 TAF9BQ9HBM6 251 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 CHMP1AQ9HD42 196 aaPredicted RBP10.75□□□□□ -0.69
CLK3-216ENST00000564468 ABRACLQ9P1F3 81 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 RAB22AQ9UL26 194 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 HSF4Q9ULV5 492 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 MGAT4AQ9UM21 535 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 STUB1Q9UNE7 303 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 SSR3Q9UNL2 185 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 WNK1Q9H4A3 2382 aa10.75□□□□□ -0.69
CLK3-216ENST00000564468 IGHV3-43A0A0B4J1X8 118 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 PEX14O75381 377 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 RGS11O94810 467 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 OR2F2O95006 317 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 IGHV3-43DP0DP04 118 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 JUNBP17275 347 aaPredicted RBP10.74□□□□□ -0.69
CLK3-216ENST00000564468 HTD2P86397 168 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 ZNF816Q0VGE8 651 aaPredicted RBP10.74□□□□□ -0.69
CLK3-216ENST00000564468 UTF1Q5T230 341 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 HES5Q5TA89 166 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 C22orf42Q6IC83 251 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 Q6ZTK2 550 aa10.74□□□□□ -0.69
CLK3-216ENST00000564468 MOB1BQ7L9L4 216 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms