RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 DOC2BQ14184 412 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 HNF4GQ14541 408 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 LRRC36Q1X8D7 754 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 C10orf99Q6UWK7 81 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 ZNF554Q86TJ5 538 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 C8orf59Q8N0T1 100 aaPredicted RBP11.87□□□□□ -0.51
SPG7-210ENST00000564409 NKAIN3Q8N8D7 197 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 OR13C5Q8NGS8 318 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 EAF1Q96JC9 268 aaPredicted RBP11.87□□□□□ -0.51
SPG7-210ENST00000564409 UQCC2Q9BRT2 126 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 LIN7CQ9NUP9 197 aaKnown RBP11.87□□□□□ -0.51
SPG7-210ENST00000564409 ZNF581Q9P0T4 197 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 GHRLQ9UBU3 117 aa11.87□□□□□ -0.51
SPG7-210ENST00000564409 ZMAT5Q9UDW3 170 aaKnown RBP11.87□□□□□ -0.51
SPG7-210ENST00000564409 AP4M1O00189 453 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 SC5DO75845 299 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 FUT3P21217 361 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 CAPGP40121 348 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 WNT4P56705 351 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 RAB12Q6IQ22 244 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 GLIPR1L1Q6UWM5 242 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 SLC25A48Q6ZT89 311 aaKnown RBP11.86□□□□□ -0.51
SPG7-210ENST00000564409 Q8N6K4 173 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 LINC00482Q8N8I6 264 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 CCDC107Q8WV48 283 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 RTN4IP1Q8WWV3 396 aaPredicted RBP11.86□□□□□ -0.51
SPG7-210ENST00000564409 DPF1Q92782 380 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 MUL1Q969V5 352 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 ORAI1Q96D31 301 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 DERL3Q96Q80 235 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 OR14A2Q96R54 314 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 ABCG5Q9H222 651 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 ETAA1Q9NY74 926 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 PSORS1C1Q9UIG5 152 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 TRAPPC2LQ9UL33 140 aa11.86□□□□□ -0.51
SPG7-210ENST00000564409 A0A1W2PP11 408 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 A0A1W2PPE3 182 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 MAGEA13PA6NCF6 341 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 NCBP2LA6PVI3 153 aaKnown RBP11.85□□□□□ -0.51
SPG7-210ENST00000564409 MYL12BO14950 172 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 MOSP00540 346 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 MGMTP16455 207 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 CELP19835 753 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 MYCNOSP40205 109 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 GP2P55259 537 aaKnown RBP11.85□□□□□ -0.51
SPG7-210ENST00000564409 EGFEM1PQ0D2K5 195 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 SYT6Q5T7P8 510 aaPredicted RBP11.85□□□□□ -0.51
SPG7-210ENST00000564409 AWAT2Q6E213 333 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 TEX38Q6PEX7 206 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 OR2W3Q7Z3T1 314 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 ZNF329Q86UD4 541 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 STPG2Q8N412 459 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 TMEM104Q8NE00 496 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 FBLIM1Q8WUP2 373 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 GNG12Q9UBI6 72 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 LRRC42Q9Y546 428 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 PEX16Q9Y5Y5 336 aa11.85□□□□□ -0.51
SPG7-210ENST00000564409 C12orf77C9JDV5 145 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 HBZP02008 142 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 UBBP0CG47 229 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 THBS3P49746 956 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 DCTN2Q13561 401 aaKnown RBP11.84□□□□□ -0.51
SPG7-210ENST00000564409 RCN1Q15293 331 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 PNLIPRP3Q17RR3 467 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 LYPD6Q86Y78 171 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 MRPL41Q8IXM3 137 aaKnown RBP11.84□□□□□ -0.51
SPG7-210ENST00000564409 MS4A15Q8N5U1 240 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 ZFP41Q8N8Y5 198 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 ZNF439Q8NDP4 499 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 Q96M66 194 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 NOL4LQ96MY1 436 aaPredicted RBP11.84□□□□□ -0.51
SPG7-210ENST00000564409 CHCHD6Q9BRQ6 235 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 SELENOIQ9C0D9 397 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 CST11Q9H112 138 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 VCXQ9H320 206 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 KCNIP1Q9NZI2 227 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 ZNF580Q9UK33 172 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 ERGIC3Q9Y282 383 aa11.84□□□□□ -0.51
SPG7-210ENST00000564409 NUDT19A8MXV4 375 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 RRP9O43818 475 aaKnown RBP11.83□□□□□ -0.52
SPG7-210ENST00000564409 CRTAPO75718 401 aaPredicted RBP11.83□□□□□ -0.52
SPG7-210ENST00000564409 MPIG6BO95866 241 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 MAS1P04201 325 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 GPR12P47775 334 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 REG1BP48304 166 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 LY6G6FQ5SQ64 297 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 RNLSQ5VYX0 342 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 ETV3LQ6ZN32 361 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 ZNF695Q8IW36 515 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 NANOGP1Q8N7R0 232 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 Q8N9W7 124 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 S1PR3Q99500 378 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 RASL11BQ9BPW5 248 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 PLSCR3Q9NRY6 295 aa11.83□□□□□ -0.52
SPG7-210ENST00000564409 MBNL3Q9NUK0 354 aaKnown RBP11.83□□□□□ -0.52
SPG7-210ENST00000564409 IGHV3-43A0A0B4J1X8 118 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 IGHV3-72A0A0B4J1Y9 119 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 A0A1W2PPK0 400 aa11.82□□□□□ -0.52
SPG7-210ENST00000564409 CASQ2O14958 399 aaPredicted RBP11.82□□□□□ -0.52
SPG7-210ENST00000564409 LANCL1O43813 399 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms